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Package 72/658HostnameOS / ArchBUILDCHECKBUILD BIN
BiocInstaller 1.9.8
Bioconductor Package Maintainer
Snapshot Date: 2013-03-24 17:01:43 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/BiocInstaller
Last Changed Rev: 74316 / Revision: 74774
Last Changed Date: 2013-03-13 17:47:23 -0700 (Wed, 13 Mar 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: BiocInstaller
Version: 1.9.8
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch BiocInstaller_1.9.8.tar.gz
StartedAt: 2013-03-25 01:24:17 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 01:24:40 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 22.7 seconds
RetCode: 0
Status:  OK 
CheckDir: BiocInstaller.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.12-bioc/meat/BiocInstaller.Rcheck'
* using R Under development (unstable) (2013-02-26 r62077)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'BiocInstaller/DESCRIPTION' ... OK
* this is package 'BiocInstaller' version '1.9.8'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package 'BiocInstaller' can be installed ... [2s/2s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [1s/1s] OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
  Running 'BiocInstaller_unit_tests.R' [1s/1s]
 [2s/2s] OK
* checking PDF version of manual ... OK

BiocInstaller.Rcheck/00install.out:

* installing *source* package 'BiocInstaller' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Bioconductor version 2.12 (BiocInstaller 1.9.8), ?biocLite for help
* DONE (BiocInstaller)

BiocInstaller.Rcheck/BiocInstaller-Ex.timings:

nameusersystemelapsed
BiocUpgrade0.0090.0070.015
biocLite0.0700.0310.143
biocVersion0.0090.0060.015
biocinstallRepos0.0170.0090.026
packageGroups0.1900.0200.224
useDevel0.0080.0070.028