Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L [M] N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 349/565HostnameOS / ArchBUILDCHECKBUILD BIN
methylumi 2.3.2
Sean Davis
Snapshot Date: 2012-06-20 15:22:40 -0700 (Wed, 20 Jun 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/methylumi
Last Changed Rev: 66718 / Revision: 66885
Last Changed Date: 2012-06-13 18:54:00 -0700 (Wed, 13 Jun 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: methylumi
Version: 2.3.2
Command: rm -rf methylumi.buildbin-libdir && mkdir methylumi.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh methylumi_2.3.2.tar.gz /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R methylumi.buildbin-libdir
StartedAt: 2012-06-21 05:02:02 -0700 (Thu, 21 Jun 2012)
EndedAt: 2012-06-21 05:02:24 -0700 (Thu, 21 Jun 2012)
EllapsedTime: 22.3 seconds
RetCode: 0
Status:  OK 
PackageFile: methylumi_2.3.2.tgz
PackageFileSize: 3.726 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=methylumi.buildbin-libdir methylumi_2.3.2.tar.gz'
>>>>>>> 

* installing *source* package 'methylumi' ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import 'image' when loading 'graphics'
in method for 'total.intensity' with signature 'object="MethyLumiSet"': no definition for class "MethyLumiSet"
in method for 'total.intensity' with signature 'object="MethyLumiM"': no definition for class "MethyLumiM"
in method for 'intensitiesByChannel' with signature 'object="MethyLumiSet"': no definition for class "MethyLumiSet"
in method for 'intensitiesByChannel' with signature 'object="MethyLumiM"': no definition for class "MethyLumiM"
in method for 'Cy3.SD' with signature 'object="MethyLumiSet"': no definition for class "MethyLumiSet"
in method for 'Cy3.N' with signature 'object="MethyLumiSet"': no definition for class "MethyLumiSet"
in method for 'Cy5.SD' with signature 'object="MethyLumiSet"': no definition for class "MethyLumiSet"
in method for 'Cy5.N' with signature 'object="MethyLumiSet"': no definition for class "MethyLumiSet"
in method for 'negctls' with signature 'object="MethyLumiSet",channel="character"': no definition for class "MethyLumiSet"
in method for 'negctls' with signature 'object="MethyLumiSet",channel="missing"': no definition for class "MethyLumiSet"
in method for 'negctls' with signature 'object="MethyLumiM",channel="character"': no definition for class "MethyLumiM"
in method for 'negctls' with signature 'object="MethyLumiM",channel="missing"': no definition for class "MethyLumiM"
in method for 'negctls.SD' with signature 'object="MethyLumiSet",channel="character"': no definition for class "MethyLumiSet"
in method for 'negctls.SD' with signature 'object="MethyLumiM",channel="character"': no definition for class "MethyLumiM"
in method for 'negctls.stderr' with signature 'object="MethyLumiSet",channel="character"': no definition for class "MethyLumiSet"
in method for 'negctls.stderr' with signature 'object="MethyLumiSet",channel="missing"': no definition for class "MethyLumiSet"
in method for 'negnorm' with signature 'object="MethyLumiSet",channel="character"': no definition for class "MethyLumiSet"
in method for 'negnorm' with signature 'object="MethyLumiM",channel="character"': no definition for class "MethyLumiM"
in method for 'negnorm' with signature 'object="MethyLumiSet",channel="missing"': no definition for class "MethyLumiSet"
in method for 'negnorm' with signature 'object="MethyLumiM",channel="missing"': no definition for class "MethyLumiM"
in method for 'normctls' with signature 'object="MethyLumiSet"': no definition for class "MethyLumiSet"
in method for 'normctls' with signature 'object="MethyLumiM"': no definition for class "MethyLumiM"
** help
*** installing help indices
** building package indices
** installing vignettes
   'methylumi.Rnw' 
** testing if installed package can be loaded
Warning: replacing previous import 'image' when loading 'graphics'

* DONE (methylumi)