iSeq 1.9.0
Qianxing Mo
| Snapshot Date: 2012-06-20 15:22:40 -0700 (Wed, 20 Jun 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/iSeq | | Last Changed Rev: 65581 / Revision: 66885 | | Last Changed Date: 2012-04-29 09:50:03 -0700 (Sun, 29 Apr 2012) |
| lamb1 | Linux (openSUSE 12.1) / x86_64 | OK | OK | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | OK | [ OK ] |
| perceval | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=iSeq.buildbin-libdir iSeq_1.9.0.tar.gz'
>>>>>>>
* installing *source* package 'iSeq' ...
** libs
*** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include/i386 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c iSeq.c -o iSeq.o
iSeq.c: In function 'iSeq1':
iSeq.c:208: warning: unused variable 'j'
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o iSeq.so iSeq.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/iSeq.buildbin-libdir/iSeq/libs/i386
** R
** data
** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'iSeq.Rnw'
** testing if installed package can be loaded
* DONE (iSeq)
>>>>>>>
>>>>>>> FIXING LINKS FOR iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so"
>>>>>>>
>>>>>>> INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --preclean --no-multiarch --no-test-load --library=iSeq.buildbin-libdir --libs-only iSeq_1.9.0.tar.gz'
>>>>>>>
* installing *source* package 'iSeq' ...
** libs
*** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include/ppc -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c iSeq.c -o iSeq.o
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o iSeq.so iSeq.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/iSeq.buildbin-libdir/iSeq/libs/ppc
* DONE (iSeq)
>>>>>>>
>>>>>>> FIXING LINKS FOR iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so"
>>>>>>>
>>>>>>> INSTALLATION OF x86_64 LIBS WITH 'R_ARCH=/x86_64 R CMD INSTALL --preclean --no-multiarch --no-test-load --library=iSeq.buildbin-libdir --libs-only iSeq_1.9.0.tar.gz'
>>>>>>>
* installing *source* package 'iSeq' ...
** libs
*** arch - x86_64
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include -I/Library/Frameworks/R.framework/Versions/2.15/Resources/include/x86_64 -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c iSeq.c -o iSeq.o
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o iSeq.so iSeq.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.11-bioc/meat/iSeq.buildbin-libdir/iSeq/libs/x86_64
* DONE (iSeq)
>>>>>>>
>>>>>>> FIXING LINKS FOR iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgcc_s.1.dylib" "iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libgfortran.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.5.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.15/Resources/lib/libreadline.dylib" "iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so"