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Package 199/609HostnameOS / ArchBUILDCHECKBUILD BIN
flowClust 2.16.0
Raphael Gottardo
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/flowClust
Last Changed Rev: 70050 / Revision: 74773
Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: flowClust
Version: 2.16.0
Command: rm -rf flowClust.buildbin-libdir && mkdir flowClust.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=flowClust.buildbin-libdir flowClust_2.16.0.tar.gz
StartedAt: 2013-03-25 03:55:21 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 03:56:03 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 42.2 seconds
RetCode: 0
Status:  OK  
PackageFile: flowClust_2.16.0.zip
PackageFileSize: 819.7 KiB

Command output


install for i386

* installing *source* package 'flowClust' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -mtune=core2 -c BoxCox.c -o BoxCox.o
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -mtune=core2 -c Nu.c -o Nu.o
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -mtune=core2 -c flowClust.c -o flowClust.o
flowClust.c: In function 'flowClust':
flowClust.c:489:13: warning: 's3' may be used uninitialized in this function [-Wuninitialized]
flowClust.c:429:18: warning: 's2' may be used uninitialized in this function [-Wuninitialized]
flowClust.c:244:17: warning: 's' may be used uninitialized in this function [-Wuninitialized]
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -mtune=core2 -c flowClustGaussian.c -o flowClustGaussian.o
flowClustGaussian.c: In function 'flowClustGaussian':
flowClustGaussian.c:203:17: warning: 's' may be used uninitialized in this function [-Wuninitialized]
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/i386/include   -O3 -Wall  -std=gnu99 -mtune=core2 -c ranMVNT.c -o ranMVNT.o
gcc -m32 -shared -s -static-libgcc -o flowClust.dll tmp.def BoxCox.o Nu.o flowClust.o flowClustGaussian.o ranMVNT.o -LC:/GSL/i386/lib -lgsl -lgslcblas -lm -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/flowClust.buildbin-libdir/flowClust/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'flowClust.Rnw' 
** testing if installed package can be loaded

install for x64

* installing *source* package 'flowClust' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -mtune=core2 -c BoxCox.c -o BoxCox.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -mtune=core2 -c Nu.c -o Nu.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -mtune=core2 -c flowClust.c -o flowClust.o
flowClust.c: In function 'flowClust':
flowClust.c:489:13: warning: 's3' may be used uninitialized in this function [-Wuninitialized]
flowClust.c:429:18: warning: 's2' may be used uninitialized in this function [-Wuninitialized]
flowClust.c:244:17: warning: 's' may be used uninitialized in this function [-Wuninitialized]
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -mtune=core2 -c flowClustGaussian.c -o flowClustGaussian.o
flowClustGaussian.c: In function 'flowClustGaussian':
flowClustGaussian.c:203:17: warning: 's' may be used uninitialized in this function [-Wuninitialized]
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"  -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -mtune=core2 -c ranMVNT.c -o ranMVNT.o
gcc -m64 -shared -s -static-libgcc -o flowClust.dll tmp.def BoxCox.o Nu.o flowClust.o flowClustGaussian.o ranMVNT.o -LC:/GSL/x64/lib -lgsl -lgslcblas -lm -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/flowClust.buildbin-libdir/flowClust/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'flowClust' as flowClust_2.16.0.zip

* DONE (flowClust)