aroma.light 1.25.3
Henrik Bengtsson
| Snapshot Date: 2012-06-20 15:22:40 -0700 (Wed, 20 Jun 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/aroma.light | | Last Changed Rev: 65204 / Revision: 66885 | | Last Changed Date: 2012-04-16 22:53:18 -0700 (Mon, 16 Apr 2012) |
| lamb1 | Linux (openSUSE 12.1) / x86_64 | OK | WARNINGS | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | WARNINGS | OK |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | [ WARNINGS ] | OK |
| perceval | Mac OS X Leopard (10.5.8) / i386 | OK | WARNINGS | OK |
* using log directory '/Users/biocbuild/bbs-2.11-bioc/meat/aroma.light.Rcheck'
* using R version 2.15.0 Patched (2012-04-26 r59216)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'aroma.light/DESCRIPTION' ... OK
* this is package 'aroma.light' version '1.25.3'
* package encoding: latin1
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'aroma.light' can be installed ... WARNING
Found the following significant warnings:
Warning: unable to re-encode '901.CalibrationAndNormalization.R' line(s) 28,67,162
Warning: unable to re-encode 'normalizeCurveFit.matrix.R' line(s) 112
Warning: unable to re-encode 'weightedMedian.R' line(s) 104
See '/Users/biocbuild/bbs-2.11-bioc/meat/aroma.light.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... WARNING
'library' or 'require' call not declared from: 'R.basic'
* checking examples ... WARNING
checking a package with encoding 'latin1' in an ASCII locale
OK
* checking PDF version of manual ... OK
WARNING: There were 3 warnings.
See
'/Users/biocbuild/bbs-2.11-bioc/meat/aroma.light.Rcheck/00check.log'
for details.
* installing *source* package 'aroma.light' ...
** R
Warning: unable to re-encode '901.CalibrationAndNormalization.R' line(s) 28,67,162
Warning: unable to re-encode 'normalizeCurveFit.matrix.R' line(s) 112
Warning: unable to re-encode 'weightedMedian.R' line(s) 104
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (aroma.light)