Package: VegaMC

Version: 2.0.0

Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data VegaMC

StartedAt: 2012-06-20 20:59:30 -0700 (Wed, 20 Jun 2012)

EndedAt: 2012-06-20 20:59:59 -0700 (Wed, 20 Jun 2012)

EllapsedTime: 28.8 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

* checking for file 'VegaMC/DESCRIPTION' ... OK
* preparing 'VegaMC':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: biomaRt
Loading required package: Biobase
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following object(s) are masked from 'package:stats':

    xtabs

The following object(s) are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, cbind,
    colnames, duplicated, eval, get, intersect, lapply, mapply, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rbind, rep.int,
    rownames, sapply, setdiff, table, tapply, union, unique

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: genoset
Loading required package: IRanges
Loading required package: GenomicRanges

Error: processing vignette 'VegaMC.Rnw' failed with diagnostics:
 chunk 5 (label = Create_BAFSet) 
Error in assayDataNew(storage.mode = "environment", ...) : 
  'AssayData' elements with invalid dimensions: 'universe'
Execution halted