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Package 530/609HostnameOS / ArchBUILDCHECKBUILD BIN
SamSPECTRAL 1.12.0
Habil Zare
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/SamSPECTRAL
Last Changed Rev: 70050 / Revision: 74773
Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  WARNINGS 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS [ OK ]
perceval Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 

Summary

Package: SamSPECTRAL
Version: 1.12.0
Command: rm -rf SamSPECTRAL.buildbin-libdir && mkdir SamSPECTRAL.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=SamSPECTRAL.buildbin-libdir SamSPECTRAL_1.12.0.tar.gz
StartedAt: 2013-03-25 04:21:42 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 04:22:01 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 19.7 seconds
RetCode: 0
Status:  OK  
PackageFile: SamSPECTRAL_1.12.0.zip
PackageFileSize: 769.8 KiB

Command output


install for i386

* installing *source* package 'SamSPECTRAL' ...
** libs
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c Rinit.c -o Rinit.o
In file included from Rinit.c:7:0:
D:/biocbld/BBS-2˜1.11-/R/include/R_ext/RConverters.h:32:2: warning: #warning "R_ext/RConverters.h was deprecated in R 2.15.1 and will be removed in R 3.0.0" [-Wcpp]
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c conductance_computation.c -o conductance_computation.o
conductance_computation.c: In function 'conductance_computation':
conductance_computation.c:155:17: warning: variable 'repres_ind' set but not used [-Wunused-but-set-variable]
conductance_computation.c:155:7: warning: variable 'density' set but not used [-Wunused-but-set-variable]
conductance_computation.c:153:31: warning: unused variable 'dj' [-Wunused-variable]
conductance_computation.c:153:27: warning: unused variable 'di' [-Wunused-variable]
conductance_computation.c:152:20: warning: unused variable 'memberLen' [-Wunused-variable]
gcc -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c maximum_of_rows.c -o maximum_of_rows.o
gcc -m32 -shared -s -static-libgcc -o SamSPECTRAL.dll tmp.def Rinit.o conductance_computation.o maximum_of_rows.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/SamSPECTRAL.buildbin-libdir/SamSPECTRAL/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'Clustering_by_SamSPECTRAL.Rnw' 
** testing if installed package can be loaded

install for x64

* installing *source* package 'SamSPECTRAL' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c Rinit.c -o Rinit.o
In file included from Rinit.c:7:0:
D:/biocbld/BBS-2˜1.11-/R/include/R_ext/RConverters.h:32:2: warning: #warning "R_ext/RConverters.h was deprecated in R 2.15.1 and will be removed in R 3.0.0" [-Wcpp]
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c conductance_computation.c -o conductance_computation.o
conductance_computation.c: In function 'conductance_computation':
conductance_computation.c:155:17: warning: variable 'repres_ind' set but not used [-Wunused-but-set-variable]
conductance_computation.c:155:7: warning: variable 'density' set but not used [-Wunused-but-set-variable]
conductance_computation.c:153:31: warning: unused variable 'dj' [-Wunused-variable]
conductance_computation.c:153:27: warning: unused variable 'di' [-Wunused-variable]
conductance_computation.c:152:20: warning: unused variable 'memberLen' [-Wunused-variable]
gcc -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c maximum_of_rows.c -o maximum_of_rows.o
gcc -m64 -shared -s -static-libgcc -o SamSPECTRAL.dll tmp.def Rinit.o conductance_computation.o maximum_of_rows.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/SamSPECTRAL.buildbin-libdir/SamSPECTRAL/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SamSPECTRAL' as SamSPECTRAL_1.12.0.zip

* DONE (SamSPECTRAL)