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Package 88/609HostnameOS / ArchBUILDCHECKBUILD BIN
CALIB 1.24.0
Hui Zhao
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/CALIB
Last Changed Rev: 70050 / Revision: 74773
Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: CALIB
Version: 1.24.0
Command: rm -rf CALIB.buildbin-libdir && mkdir CALIB.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=CALIB.buildbin-libdir CALIB_1.24.0.tar.gz
StartedAt: 2013-03-25 03:48:15 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 03:48:58 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 42.8 seconds
RetCode: 0
Status:  OK  
PackageFile: CALIB_1.24.0.zip
PackageFileSize: 2.207 MiB

Command output


install for i386

* installing *source* package 'CALIB' ...
** libs
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c Design.cpp -o Design.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c Estimation.cpp -o Estimation.o
Estimation.cpp: In function 'SEXPREC* estimation(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c NormalizedData.cpp -o NormalizedData.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c ParameterofOneArray.cpp -o ParameterofOneArray.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c RawDataofOneArray.cpp -o RawDataofOneArray.o
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c SpikeofOneArray.cpp -o SpikeofOneArray.o
g++ -m32 -shared -s -static-libgcc -o CALIB.dll tmp.def Design.o Estimation.o NormalizedData.o ParameterofOneArray.o RawDataofOneArray.o SpikeofOneArray.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/CALIB.buildbin-libdir/CALIB/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'quickstart.Rnw' 
** testing if installed package can be loaded

install for x64

* installing *source* package 'CALIB' ...
** libs
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c Design.cpp -o Design.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c Estimation.cpp -o Estimation.o
Estimation.cpp: In function 'SEXPREC* estimation(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
Estimation.cpp:144:78: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c NormalizedData.cpp -o NormalizedData.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c ParameterofOneArray.cpp -o ParameterofOneArray.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c RawDataofOneArray.cpp -o RawDataofOneArray.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c SpikeofOneArray.cpp -o SpikeofOneArray.o
g++ -m64 -shared -s -static-libgcc -o CALIB.dll tmp.def Design.o Estimation.o NormalizedData.o ParameterofOneArray.o RawDataofOneArray.o SpikeofOneArray.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/CALIB.buildbin-libdir/CALIB/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CALIB' as CALIB_1.24.0.zip

* DONE (CALIB)