Package: MAQCsubsetILM

Version: 1.0.6

Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch MAQCsubsetILM_1.0.6.tar.gz

StartedAt: 2012-09-23 12:52:35 -0700 (Sun, 23 Sep 2012)

EndedAt: 2012-09-23 12:55:27 -0700 (Sun, 23 Sep 2012)

EllapsedTime: 172.9 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: MAQCsubsetILM.Rcheck

Warnings: 1

* using log directory '/Users/biocbuild/bbs-2.10-data-experiment/meat/MAQCsubsetILM.Rcheck'
* using R version 2.15.1 (2012-06-22)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'MAQCsubsetILM/DESCRIPTION' ... OK
* this is package 'MAQCsubsetILM' version '1.0.6'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'MAQCsubsetILM' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  7.4Mb
  sub-directories of 1Mb or more:
    data   7.2Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
             old_size new_size compress
  refA.RData    1.8Mb    710Kb       xz
  refB.RData    1.8Mb    701Kb       xz
  refC.RData    1.8Mb    709Kb       xz
  refD.RData    1.8Mb    701Kb       xz
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  '/Users/biocbuild/bbs-2.10-data-experiment/meat/MAQCsubsetILM.Rcheck/00check.log'
for details.

* installing *source* package 'MAQCsubsetILM' ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
   'MAQCsubsetILM.Rnw' 
** testing if installed package can be loaded
Warning: replacing previous import 'image' when loading 'graphics'
Warning: replacing previous import 'density' when loading 'stats'
Warning: replacing previous import 'residuals' when loading 'stats'

* DONE (MAQCsubsetILM)