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Package 156/233HostnameOS / ArchBUILDCHECKBUILD BIN
pcaMethods 1.14.0
Wolfram Stacklies
Snapshot Date: 2008-04-02 12:12:36 -0700 (Wed, 02 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/pcaMethods
Last Changed Rev: 27709 / Revision: 30807
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: pcaMethods
Version: 1.14.0
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build pcaMethods
StartedAt: 2008-04-02 17:15:56 -0700 (Wed, 02 Apr 2008)
EndedAt: 2008-04-02 17:22:52 -0700 (Wed, 02 Apr 2008)
EllapsedTime: 416.0 seconds
RetCode: 0
Status: OK
PackageFile: pcaMethods_1.14.0.tar.gz
PackageFileSize: 431.3 KiB

Command output

* checking for file 'pcaMethods/DESCRIPTION' ... OK
* preparing 'pcaMethods':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst446483059


---------- Making package pcaMethods ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  preparing package pcaMethods for lazy loading
Loading required package: MASS
Loading required package: pls

Attaching package: 'pls'


	The following object(s) are masked from package:stats :

	 loadings 

Creating a new generic function for "print" in "pcaMethods"
Creating a new generic function for "summary" in "pcaMethods"
Creating a new generic function for "fitted" in "pcaMethods"
  installing man source files
  installing indices
  not zipping data
  installing help
Note: unmatched right brace in 'nlpca' on or after line 60
Note: unmatched right brace in 'nlpca.Rd' on or after line 60
 >>> Building/Updating help pages for package 'pcaMethods'
     Formats: text html latex example chm 
  Q2                                text    html    latex   example chm
  asExprSet                         text    html    latex           chm
  bpca                              text    html    latex   example chm
  checkData                         text    html    latex           chm
  class.nlpcaNet                    text    html    latex           chm
  class.nniRes                      text    html    latex           chm
  class.pcaRes                      text    html    latex           chm
  fitted.pcaRes                     text    html    latex           chm
  helix                             text    html    latex           chm
  kEstimate                         text    html    latex   example chm
  kEstimateFast                     text    html    latex   example chm
  llsImpute                         text    html    latex   example chm
  metaboliteData                    text    html    latex           chm
  metaboliteDataComplete            text    html    latex           chm
  nipalsPca                         text    html    latex   example chm
  nlpca                             text    html    latex   example chm
  nni                               text    html    latex   example chm
  pca                               text    html    latex   example chm
  plotPcs                           text    html    latex   example chm
  plotR2                            text    html    latex           chm
  ppca                              text    html    latex   example chm
  prep                              text    html    latex   example chm
  robustPca                         text    html    latex   example chm
  robustSvd                         text    html    latex   example chm
  slplot                            text    html    latex   example chm
  svdImpute                         text    html    latex   example chm
  svdPca                            text    html    latex   example chm
HHC5012: Error: Cannot create a temporary file in your TEMP path.

HHC4016: Warning: Cannot open "ymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".

Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\pcaMethods\chm\pcaMethods.chm



HHC4016: Warning: Cannot open "ymetrix\GDAC NetAffx;c:\gs\gs8.51\bin;c:\Program Files\Java\jdk1.5.0_06\bin;c:\program files\imagemagick-6.3.2-q16;c:\Program Files\MySQL\MySQL Server 5.0\bin;c:\Program Files\ggobi".





The following files were not compiled:

  adding MD5 sums

* DONE (pcaMethods)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'pcaMethods_1.14.0.tar.gz'