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| Package 205/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
| siggenes 1.12.0 Holger Schwender Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | [ OK ] | OK | |
| pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
| Package: siggenes |
| Version: 1.12.0 |
| Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check siggenes_1.12.0.tar.gz |
| RetCode: 0 |
| Time: 100.8 seconds |
| Status: OK |
| CheckDir: siggenes.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory 'E:/biocbld/bbs-2.1-bioc/meat/siggenes.Rcheck' * using R version 2.6.0 (2007-10-03) * checking for file 'siggenes/DESCRIPTION' ... OK * this is package 'siggenes' version '1.12.0' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'siggenes' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE filterALL: no visible global function definition for 'filterALL2' * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating siggenes-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating siggenes-manual.tex ... OK * checking siggenes-manual.tex ... OK
siggenes.Rcheck/00install.out:
installing R.css in E:/biocbld/bbs-2.1-bioc/meat/siggenes.Rcheck
---------- Making package siggenes ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'siggenes'
Formats: text html latex example chm
EBAM-class text html latex example chm
FindA0-class text html latex chm
SAM-class text html latex example chm
cat.ebam text html latex chm
cat.stat text html latex chm
d.stat text html latex chm
delta.plot text html latex example chm
denspr text html latex chm
ebam text html latex example chm
find.a0 text html latex example chm
findDelta text html latex chm
fudge2 text html latex chm
help.ebam text html latex example chm
help.finda0 text html latex example chm
help.sam text html latex example chm
link.genes text html latex chm
link.siggenes text html latex chm
list.siggenes text html latex example chm
nclass.wand text html latex chm
pi0.est text html latex example chm
plotArguments text html latex chm
plotFindArguments text html latex chm
qvalue.cal text html latex example chm
rowWilcoxon text html latex chm
sam text html latex example chm
sam.plot2 text html latex example chm
siggenes-internal text html latex chm
siggenes2excel text html latex chm
siggenes2html text html latex chm
sumSAM-class text html latex chm
wilc.ebam text html latex chm
wilc.stat text html latex chm
z.ebam text html latex chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.1-bioc\meat\siggenes.Rcheck\00_pkg_src\siggenes\chm\siggenes.chm
Compile time: 0 minutes, 0 seconds
34 Topics
211 Local links
2 Internet links
1 Graphic
Created e:\biocbld\bbs-2.1-bioc\meat\siggenes.Rcheck\00_pkg_src\siggenes\chm\siggenes.chm, 86,385 bytes
Compression decreased file by 125,350 bytes.
preparing package siggenes for lazy loading
Loading required package: multtest
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: survival
Loading required package: splines
Creating a new generic function for "print" in "siggenes"
Creating a new generic function for "identify" in "siggenes"
adding MD5 sums
* DONE (siggenes)