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| Package 154/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
| pamr 1.36.0 Rob Tibshirani Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | WARNINGS | [ OK ] | |
| pitt | Mac OS X (10.4.10) | i386 | OK | WARNINGS | OK |
| Package: pamr |
| Version: 1.36.0 |
| Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD INSTALL --build --library=pamr.buildbin-libdir pamr_1.36.0.tar.gz |
| RetCode: 0 |
| Time: 22.3 seconds |
| Status: OK |
| PackageFile: pamr_1.36.0.zip |
installing R.css in E:/biocbld/bbs-2.1-bioc/meat/pamr.buildbin-libdir
Using auto-selected zip options 'pamr-ZIPDATA=zip pamr-HELP=ziponly'
---------- Making package pamr ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making cox_func.d from cox_func.c
gcc-sjlj -std=gnu99 -IE:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -c cox_func.c -o cox_func.o
gfortran-sjlj -O3 -Wall -c knnimpute.f -o knnimpute.o
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knnimpute.f:6.37:
integer iworkp(p),iworkn(n), jj
1
Warning: Unused variable jj declared at (1)
knnimpute.f: In function 'twomis':
knnimpute.f:132: warning: 'dold' may be used uninitialized in this function
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I E:/biocbld/bbs-2.1-bioc/R/include -i pamr_res.rc -o pamr_res.o
gcc-sjlj -std=gnu99 -shared -s -o pamr.dll pamr.def cox_func.o knnimpute.o pamr_res.o -LE:/biocbld/bbs-2.1-bioc/R/bin -lgfortran -lR
... DLL made
installing DLL
installing R files
installing inst files
installing data files
installing man source files
installing indices
zipping data
installing help
Note: unmatched right brace in 'pamr.confusion.survival' on or after line 24
Note: unmatched right brace in 'pamr.confusion.survival.Rd' on or after line 24
Note: unmatched right brace in 'pamr.listgenes' on or after line 8
Note: unmatched right brace in 'pamr.listgenes.Rd' on or after line 8
Note: unmatched right brace in 'pamr.plotcen' on or after line 7
Note: unmatched right brace in 'pamr.plotcen.Rd' on or after line 7
Note: unmatched right brace in 'pamr.predict' on or after line 8
Note: unmatched right brace in 'pamr.predict.Rd' on or after line 8
Note: unmatched right brace in 'pamr.predictmany' on or after line 8
Note: unmatched right brace in 'pamr.predictmany.Rd' on or after line 8
>>> Building/Updating help pages for package 'pamr'
Formats: text html latex example chm
khan text html latex chm
pamr.adaptthresh text html latex example chm
pamr.batchadjust text html latex example chm
pamr.confusion text html latex example chm
pamr.confusion.survival text html latex example chm
pamr.cv text html latex example chm
pamr.decorrelate text html latex example chm
pamr.fdr text html latex example chm
pamr.from.excel text html latex chm
pamr.geneplot text html latex example chm
pamr.indeterminate text html latex example chm
pamr.internal text html latex chm
pamr.knnimpute text html latex chm
pamr.listgenes text html latex example chm
pamr.makeclasses text html latex example chm
pamr.menu text html latex example chm
pamr.plotcen text html latex example chm
pamr.plotcv text html latex example chm
pamr.plotcvprob text html latex example chm
pamr.plotfdr text html latex example chm
pamr.plotstrata text html latex example chm
pamr.plotsurvival text html latex example chm
pamr.predict text html latex example chm
pamr.predictmany text html latex example chm
pamr.surv.to.class2 text html latex example chm
pamr.test.errors.surv.compute text html latex example chm
pamr.to.excel text html latex chm
pamr.train text html latex example chm
zipping help files
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.1804\pamr\chm\pamr.chm
Compile time: 0 minutes, 1 second
29 Topics
55 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.1-bioc\meat\R.INSTALL.1804\pamr\chm\pamr.chm, 53,613 bytes
Compression decreased file by 56,572 bytes.
adding MD5 sums
packaged installation of package 'pamr' as pamr_1.36.0.zip
* DONE (pamr)