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Package 124/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
maigesPack 1.2.0 Gustavo H. Esteves Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | [ OK ] | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | ERROR | OK |
Package: maigesPack |
Version: 1.2.0 |
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check maigesPack_1.2.0.tar.gz |
RetCode: 0 |
Time: 377.1 seconds |
Status: OK |
CheckDir: maigesPack.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory 'E:/biocbld/bbs-2.1-bioc/meat/maigesPack.Rcheck' * using R version 2.6.0 (2007-10-03) * checking for file 'maigesPack/DESCRIPTION' ... OK * this is package 'maigesPack' version '1.2.0' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'maigesPack' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $BLAS_LIBS ... OK * creating maigesPack-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating maigesPack-manual.tex ... OK * checking maigesPack-manual.tex ... OK
maigesPack.Rcheck/00install.out:
installing R.css in E:/biocbld/bbs-2.1-bioc/meat/maigesPack.Rcheck ---------- Making package maigesPack ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata making DLL ... making Minfo.d from Minfo.c making bootstrapT.d from bootstrapT.c making register.d from register.c making robustCorr.d from robustCorr.c making stats.d from stats.c gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -c Minfo.c -o Minfo.o gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -c bootstrapT.c -o bootstrapT.o gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -c register.c -o register.o gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -c robustCorr.c -o robustCorr.o gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.1-bioc/R/include -Wall -O3 -c stats.c -o stats.o windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.1-bioc/R/include -i maigesPack_res.rc -o maigesPack_res.o gcc-sjlj -std=gnu99 -shared -s -o maigesPack.dll maigesPack.def Minfo.o bootstrapT.o register.o robustCorr.o stats.o maigesPack_res.o -Le:/biocbld/bbs-2.1-bioc/R/bin -lR ... DLL made installing DLL installing R files installing inst files installing data files preparing package maigesPack for lazy loading Loading required package: convert Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: limma Loading required package: marray Loading required package: graph Loading required package: xtable installing man source files installing indices not zipping data installing help >>> Building/Updating help pages for package 'maigesPack' Formats: text html latex example chm MI text html latex example chm activeMod text html latex example chm activeModScoreHTML text html latex example chm activeNet text html latex example chm activeNetScoreHTML text html latex example chm addGeneGrps text html latex example chm addPaths text html latex example chm bootstrapCor text html latex example chm bootstrapMI text html latex example chm bootstrapT text html latex example chm boxplot-methods text html latex example chm bracketMethods text html latex example chm calcA text html latex example chm calcW text html latex example chm classifyKNN text html latex example chm classifyKNNsc text html latex example chm classifyLDA text html latex example chm classifyLDAsc text html latex example chm classifySVM text html latex example chm classifySVMsc text html latex example chm coerce-methods text html latex example chm compCorr text html latex example chm contrastsFitM text html latex chm createMaigesRaw text html latex example chm createTDMS text html latex chm deGenes2by2BootT text html latex example chm deGenes2by2Ttest text html latex example chm deGenes2by2Wilcox text html latex example chm deGenesANOVA text html latex example chm designANOVA text html latex example chm dim-methods text html latex example chm gastro text html latex chm getLabels text html latex example chm heatmapsM text html latex chm hierM text html latex example chm hierMde text html latex example chm image-methods text html latex example chm kmeansM text html latex example chm kmeansMde text html latex example chm loadData text html latex example chm maiges-class text html latex chm maigesANOVA-class text html latex chm maigesActMod-class text html latex chm maigesActNet-class text html latex chm maigesClass-class text html latex chm maigesDE-class text html latex chm maigesDEcluster-class text html latex chm maigesPreRaw-class text html latex chm maigesRaw-class text html latex chm maigesRelNetB-class text html latex chm maigesRelNetM-class text html latex chm normLoc text html latex example chm normOLIN text html latex example chm normRepLoess text html latex example chm normScaleLimma text html latex example chm normScaleMarray text html latex example chm plot-methods text html latex example chm plotGenePair text html latex example chm print-methods text html latex example chm relNet2TGF text html latex example chm relNetworkB text html latex example chm relNetworkM text html latex example chm robustCorr text html latex example chm selSpots text html latex example chm show-methods text html latex example chm somM text html latex example chm somMde text html latex example chm summarizeReplicates text html latex example chm summary-methods text html latex example chm tableClass text html latex example chm tablesDE text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling e:\biocbld\bbs-2.1-bioc\meat\maigesPack.Rcheck\00_pkg_src\maigesPack\chm\maigesPack.chm Compile time: 0 minutes, 1 second 72 Topics 777 Local links 17 Internet links 1 Graphic Created e:\biocbld\bbs-2.1-bioc\meat\maigesPack.Rcheck\00_pkg_src\maigesPack\chm\maigesPack.chm, 121,343 bytes Compression decreased file by 260,700 bytes. adding MD5 sums * DONE (maigesPack)