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Package 113/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
limma 2.12.0 Gordon Smyth Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | [ OK ] | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
Package: limma |
Version: 2.12.0 |
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build limma |
RetCode: 0 |
Time: 37.5 seconds |
Status: OK |
PackageFile: limma_2.12.0.tar.gz |
* checking for file 'limma/DESCRIPTION' ... OK * preparing 'limma': * checking DESCRIPTION meta-information ... OK * installing the package to re-build vignettes * Installing *source* package 'limma' ... ** R ** inst ** preparing package for lazy loading ** help >>> Building/Updating help pages for package 'limma' Formats: text html latex example 01Introduction text html latex 02classes text html latex 03reading text html latex 04Background text html latex 05Normalization text html latex 06linearmodels text html latex 07SingleChannel text html latex 08Tests text html latex 09Diagnostics text html latex 10Other text html latex LargeDataObject text html latex example PrintLayout text html latex example TestResults text html latex example anova-method text html latex arrayWeights text html latex example arrayWeightsQuick text html latex example asMatrixWeights text html latex example asdataframe text html latex asmalist text html latex asmatrix text html latex auROC text html latex example avedups text html latex backgroundcorrect text html latex example blockDiag text html latex example bwss text html latex bwss.matrix text html latex cbind text html latex example changelog text html latex channel2M text html latex example classifytests text html latex example contrasts.fit text html latex example controlStatus text html latex example convest text html latex example decideTests text html latex dim text html latex example dimnames text html latex dnormexp text html latex dupcor text html latex example ebayes text html latex example exprsMA text html latex exprset2 text html latex fitfdist text html latex fitted.MArrayLM text html latex geneSetTest text html latex example getSpacing text html latex example getlayout text html latex example gls.series text html latex gridspotrc text html latex heatdiagram text html latex example helpMethods text html latex example imageplot text html latex example imageplot3by2 text html latex intraspotCorrelation text html latex example isfullrank text html latex example isnumeric text html latex example kooperberg text html latex example limmaUsersGuide text html latex example lm.series text html latex lmFit text html latex example lmscFit text html latex example loessfit text html latex example m.spot text html latex ma3x3 text html latex example makeContrasts text html latex example makeunique text html latex example malist text html latex marraylm text html latex mdplot text html latex merge text html latex example mergeScansRG text html latex example modelMatrix text html latex example modifyWeights text html latex example mrlm text html latex normalizeMedianAbsValues text html latex example normalizeRobustSpline text html latex example normalizeWithinArrays text html latex example normalizebetweenarrays text html latex example normalizeprintorder text html latex example normalizequantiles text html latex normexp text html latex normexpfit text html latex example normexpsignal text html latex example plotDensities text html latex example plotFB text html latex plotlines text html latex plotma text html latex example plotma3by2 text html latex plotprinttiploess text html latex poolvar text html latex example printHead text html latex printorder text html latex example printtipWeights text html latex example protectMetachar text html latex example qqt text html latex example qualwt text html latex example read.columns text html latex read.maimages text html latex example read.matrix text html latex read.series text html latex readGPRHeader text html latex readImaGeneHeader text html latex example readSpotTypes text html latex readTargets text html latex readgal text html latex example removeext text html latex example residuals.MArrayLM text html latex rg.genepix text html latex rg.quantarray text html latex rg.series.spot text html latex rg.spot text html latex rglist text html latex splitName text html latex squeezeVar text html latex example strsplit2 text html latex example subsetting text html latex example summary text html latex targetsA2C text html latex example tmixture text html latex toptable text html latex example trigammainverse text html latex example trimWhiteSpace text html latex example uniquegenelist text html latex example unwrapdups text html latex example venn text html latex example volcanoplot text html latex example weightedmedian text html latex example writefit text html latex zscore text html latex example ** building package indices ... * DONE (limma) * creating vignettes ... OK * removing junk files * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'limma_2.12.0.tar.gz'