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| Package 51/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
| codelink 1.6.0 Diego Diez Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | [ OK ] | ||
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
| pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
| Package: codelink |
| Version: 1.6.0 |
| Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check codelink_1.6.0.tar.gz |
| RetCode: 0 |
| Time: 178.7 seconds |
| Status: OK |
| CheckDir: codelink.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/codelink.Rcheck' * using R version 2.6.0 (2007-10-03) * checking for file 'codelink/DESCRIPTION' ... OK * this is package 'codelink' version '1.6.0' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'codelink' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * creating codelink-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating codelink-manual.tex ... OK * checking codelink-manual.tex ... OK
codelink.Rcheck/00install.out:
* Installing *source* package 'codelink' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: limma
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
Loading required package: genefilter
Loading required package: survival
Loading required package: splines
** help
>>> Building/Updating help pages for package 'codelink'
Formats: text html latex example
Codelink-class text html latex example
Nondocumented-objects text html latex
SNR text html latex example
arrayNew text html latex example
arraySize text html latex
as.matrix.Codelink text html latex example
bkgdCorrect text html latex example
codelink.example text html latex
createWeights text html latex example
cutCV text html latex example
decDetect text html latex example
dim.Codelink text html latex example
fc2Cond text html latex example
imageCodelink text html latex example
logCodelink text html latex example
mergeArray text html latex example
na2false text html latex example
normalize text html latex example
normalize.loess text html latex example
plotCV text html latex example
plotCorrelation text html latex example
plotDensities text html latex example
plotMA text html latex example
printHead text html latex example
readCodelink text html latex example
readHeader text html latex example
readHeaderXLS text html latex example
reportCodelink text html latex example
selCV text html latex example
writeCodelink text html latex example
** building package indices ...
* DONE (codelink)