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Package 211/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
SMAP 1.2.0 Robin Andersson Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | [ OK ] | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
Package: SMAP |
Version: 1.2.0 |
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build SMAP |
RetCode: 0 |
Time: 89.0 seconds |
Status: OK |
PackageFile: SMAP_1.2.0.tar.gz |
* checking for file 'SMAP/DESCRIPTION' ... OK * preparing 'SMAP': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to re-build vignettes * Installing *source* package 'SMAP' ... ** libs gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c gradient.c -o gradient.o gradient.c: In function `hmm_update': gradient.c:247: warning: unused variable `tmp' gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c init.c -o init.o gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c overlap.c -o overlap.o gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c prob.c -o prob.o gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c viterbi.c -o viterbi.o gcc -std=gnu99 -shared -L/usr/local/lib -o SMAP.so gradient.o init.o overlap.o prob.o viterbi.o -L/loc/biocbuild/bbs-2.1-bioc/R/lib -lR ** R ** data ** inst ** preparing package for lazy loading Creating a new generic function for "plot" in "SMAP" ** help >>> Building/Updating help pages for package 'SMAP' Formats: text html latex example GBM text html latex example SMAP-internal text html latex SMAPHMM-class text html latex SMAPHMM text html latex SMAPObservations-class text html latex SMAPObservations text html latex example SMAPProfile-class text html latex SMAPProfiles-class text html latex smap text html latex example ** building package indices ... * DONE (SMAP) * creating vignettes ... OK * cleaning src * removing junk files * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'SMAP_1.2.0.tar.gz'