Package: LBE

Version: 1.6.0

Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check LBE_1.6.0.tar.gz

RetCode: 0

Time: 49.8 seconds

Status: OK

CheckDir: LBE.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/LBE.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'LBE/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'LBE' version '1.6.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'LBE' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
LBE: no visible binding for global variable 'pvalues'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating LBE-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating LBE-manual.tex ... OK
* checking LBE-manual.tex ... OK

* Installing *source* package 'LBE' ...
** R
** data
** inst
** help
Note: unmatched right brace in 'LBE-package' on or after line 10
Note: unmatched right brace in 'LBE-package' on or after line 11
 >>> Building/Updating help pages for package 'LBE'
     Formats: text html latex example 
  LBE-package                       text    html    latex
  LBE                               text    html    latex   example
  LBEa                              text    html    latex   example
  LBEplot                           text    html    latex   example
  LBEsummary                        text    html    latex   example
  LBEwrite                          text    html    latex   example
  golub.pval                        text    html    latex
  hedenfalk.pval                    text    html    latex
** building package indices ...
* DONE (LBE)