Package: Harshlight

Version: 1.8.0

Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build Harshlight

RetCode: 0

Time: 26.1 seconds

Status: OK

PackageFile: Harshlight_1.8.0.tar.gz

* checking for file 'Harshlight/DESCRIPTION' ... OK
* preparing 'Harshlight':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.1-bioc/tmpdir/Rinst538868411


---------- Making package Harshlight ------------
  adding build stamp to DESCRIPTION
  making DLL ...
making Harshlight.d from Harshlight.c
gcc-sjlj  -std=gnu99  -Ie:/biocbld/bbs-2.1-bioc/R/include    -Wall -O3  -c Harshlight.c -o Harshlight.o
Harshlight.c:157: warning: C99 inline functions are not supported; using GNU89
Harshlight.c:157: warning: to disable this warning use -fgnu89-inline or the gnu_inline function attribute
Harshlight.c: In function 'norm':
Harshlight.c:1316: warning: unused variable 'sorted2'
Harshlight.c: In function 'report_overall_header':
Harshlight.c:1467: warning: unknown conversion type character ')' in format
Harshlight.c:1471: warning: unknown conversion type character ')' in format
Harshlight.c:1474: warning: unknown conversion type character ')' in format
Harshlight.c: In function 'chip_summary':
Harshlight.c:1532: warning: unknown conversion type character ')' in format
Harshlight.c:1542: warning: unknown conversion type character ')' in format
Harshlight.c:1543: warning: unknown conversion type character ')' in format
Harshlight.c: In function 'extended_stop':
Harshlight.c:1555: warning: unknown conversion type character ')' in format
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.1-bioc/R/include  -i Harshlight_res.rc -o Harshlight_res.o
gcc-sjlj  -std=gnu99  -shared -s  -o Harshlight.dll Harshlight.def Harshlight.o Harshlight_res.o  -Le:/biocbld/bbs-2.1-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'Harshlight'
     Formats: text html latex example chm 
  HarshComp                         text    html    latex           chm
  HarshExt                          text    html    latex           chm
  Harshlight                        text    html    latex   example chm
  sim                               text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.1-bioc\meat\Harshlight\chm\Harshlight.chm





Compile time: 0 minutes, 0 seconds

5	Topics

11	Local links

3	Internet links

1	Graphic





Created e:\biocbld\bbs-2.1-bioc\meat\Harshlight\chm\Harshlight.chm, 24,619 bytes

Compression decreased file by 1,909 bytes.

  preparing package Harshlight for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: preprocessCore
Loading required package: altcdfenvs
Loading required package: matchprobes
Loading required package: makecdfenv
  adding MD5 sums

* DONE (Harshlight)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
    file 'Harshlight/src/Harshlight.c' had non-LF line endings
* checking for empty or unneeded directories
* building 'Harshlight_1.8.0.tar.gz'