Back to the "Multiple platform build/check report"
Package 39/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
BSgenome 1.6.0 H. Pages Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | [ OK ] | OK |
Package: BSgenome |
Version: 1.6.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check BSgenome_1.6.0.tar.gz |
RetCode: 0 |
Time: 50.2 seconds |
Status: OK |
CheckDir: BSgenome.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/Users/biocbuild/bbs-2.1-bioc/meat/BSgenome.Rcheck' * using R version 2.6.0 (2007-10-03) * checking for file 'BSgenome/DESCRIPTION' ... OK * this is package 'BSgenome' version '1.6.0' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'BSgenome' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating BSgenome-Ex.R ... OK * checking examples ... OK * creating BSgenome-manual.tex ... OK * checking BSgenome-manual.tex ... OK
BSgenome.Rcheck/00install.out:
* Installing *source* package 'BSgenome' ... ** R ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: Biostrings ** help >>> Building/Updating help pages for package 'BSgenome' Formats: text html latex example BSgenome-class text html latex example available.genomes text html latex example buildDataFiles text html latex example getSeq text html latex example ** building package indices ... * DONE (BSgenome)