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| IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
| Package 228/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
splicegear1.9.0LaurentLast Changed Date: 2007-05-11 21:56:41 -0700 Last Changed Rev: 24616 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | WARNINGS | |
| wellington | Linux (SUSE 9.2) | i686 | OK | WARNINGS | ||
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | [ OK ] | WARNINGS | OK | |
| pitt | Mac OS X (10.4.10) | i386 | OK | WARNINGS | OK |
| Package: splicegear |
| Version: 1.9.0 |
| Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build splicegear |
| RetCode: 0 |
| Time: 42.1 seconds |
| Status: OK |
| PackageFile: splicegear_1.9.0.tar.gz |
* checking for file 'splicegear/DESCRIPTION' ... OK
* preparing 'splicegear':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.1-bioc/tmpdir/Rinst414833871
---------- Making package splicegear ------------
adding build stamp to DESCRIPTION
installing R files
installing inst files
installing data files
preparing package splicegear for lazy loading
Loading required package: grid
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: XML
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Warning: The phenoData class is deprecated, use AnnotatedDataFrame (with ExpressionSet) instead
Warning: The phenoData class is deprecated, use AnnotatedDataFrame (with ExpressionSet) instead
Warning: The phenoData class is deprecated, use AnnotatedDataFrame (with ExpressionSet) instead
Warning: The exprSet class is deprecated, use ExpressionSet instead
installing man source files
installing indices
not zipping data
installing help
Note: unmatched right brace in 'grid.helpers' on or after line 28
Note: unmatched right brace in 'grid.helpers.Rd' on or after line 28
Note: unmatched right brace in 'plot.SpliceSitesGenomic' on or after line 6
Note: unmatched right brace in 'plot.SpliceSitesGenomic.Rd' on or after line 6
>>> Building/Updating help pages for package 'splicegear'
Formats: text html latex example chm
Probes-class text html latex example chm
SpliceExprSet-class text html latex example chm
SpliceSites-class text html latex example chm
SpliceSitesGenomic-class text html latex example chm
as.data.frame.SpliceExprSet text html latex example chm
barplot.SpliceSites text html latex example chm
buildSpliceSites text html latex example chm
getRelSignStrength text html latex example chm
grid.helpers text html latex chm
grid.plot.SpliceSites text html latex example chm
isProbeOnSpliceSite text html latex example chm
matchprobes2Probes text html latex chm
plot.SpliceExprSet text html latex example chm
plot.SpliceSites text html latex example chm
plot.SpliceSitesGenomic text html latex example chm
sort.SpliceExprSet text html latex example chm
spliceset text html latex example chm
split.SpliceSites text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.1-bioc\meat\splicegear\chm\splicegear.chm
Compile time: 0 minutes, 2 seconds
19 Topics
105 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.1-bioc\meat\splicegear\chm\splicegear.chm, 36,569 bytes
Compression decreased file by 38,539 bytes.
adding MD5 sums
* DONE (splicegear)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'splicegear_1.9.0.tar.gz'