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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 172/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
pgUtils1.9.0Johannes RainerLast Changed Date: 2007-04-25 16:23:45 -0700 Last Changed Rev: 24290 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | [ OK ] | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | N O T S U P P O R T E D | |||
pitt | Mac OS X (10.4.10) | i386 | OK | ERROR | ERROR |
Package: pgUtils |
Version: 1.9.0 |
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check pgUtils_1.9.0.tar.gz |
RetCode: 0 |
Time: 55.8 seconds |
Status: OK |
CheckDir: pgUtils.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/pgUtils.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-08-06 r42439) * checking for file 'pgUtils/DESCRIPTION' ... OK * this is package 'pgUtils' version '1.9.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'pgUtils' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE dbColnames: no visible binding for global variable 'res' * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating pgUtils-Ex.R ... OK * checking examples ... OK * creating pgUtils-manual.tex ... OK * checking pgUtils-manual.tex ... OK
pgUtils.Rcheck/00install.out:
* Installing *source* package 'pgUtils' ... ** R ** inst ** preparing package for lazy loading Loading required package: Rdbi Loading required package: RdbiPgSQL Attaching package: 'RdbiPgSQL' The following object(s) are masked from package:Rdbi : dbAppendTable ** help >>> Building/Updating help pages for package 'pgUtils' Formats: text html latex example AutoReference text html latex example auto.fk.name text html latex example auto.pk.name text html latex example auto.pk.seq text html latex example createDBTable text html latex example createSequence text html latex dbColnames text html latex dbListDatabases text html latex dbListSequences text html latex deleteDBEntry text html latex example do.log text html latex getRefAttribute-methods text html latex getRefColumn-methods text html latex getRefTable-methods text html latex getSourceAttribute-methods text html latex getSourceColumn-methods text html latex insertIntoTable text html latex example log.file text html latex log.level text html latex loggit text html latex example searchIn text html latex example updateDBTable text html latex example ** building package indices ... * DONE (pgUtils)