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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 101/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
goTools1.9.0Agnes PaquetLast Changed Date: 2007-05-11 21:56:41 -0700 Last Changed Rev: 24616 | lamb1 | Linux (SUSE 10.1) | x86_64 | ERROR | skipped | |
wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | [ ERROR ] | skipped | skipped | |
pitt | Mac OS X (10.4.10) | i386 | ERROR | skipped | skipped |
Package: goTools |
Version: 1.9.0 |
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build goTools |
RetCode: 1 |
Time: 37.5 seconds |
Status: ERROR |
PackageFile: None |
* checking for file 'goTools/DESCRIPTION' ... OK * preparing 'goTools': * checking DESCRIPTION meta-information ... OK * checking whether 'INDEX' is up-to-date ... NO * use '--force' to overwrite the existing 'INDEX' * installing the package to re-build vignettes installing R.css in E:/biocbld/bbs-2.1-bioc/tmpdir/Rinst598026950 ---------- Making package goTools ------------ adding build stamp to DESCRIPTION installing R files installing inst files installing data files preparing package goTools for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: annotate Loading required package: AnnotationDbi Loading required package: DBI Loading required package: RSQLite Loading required package: GO installing man source files installing indices not zipping data installing help >>> Building/Updating help pages for package 'goTools' Formats: text html latex example chm EndNodeList text html latex example chm goTools-internal text html latex chm ontoCompare text html latex example chm probeID text html latex chm Microsoft HTML Help Compiler 4.74.8702 Compiling e:\biocbld\bbs-2.1-bioc\meat\goTools\chm\goTools.chm Compile time: 0 minutes, 0 seconds 5 Topics 26 Local links 0 Internet links 1 Graphic Created e:\biocbld\bbs-2.1-bioc\meat\goTools\chm\goTools.chm, 19,980 bytes Compression increased file by 1,094 bytes. adding MD5 sums * DONE (goTools) * creating vignettes ... ERROR Loading required package: Biobase Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: annotate Loading required package: AnnotationDbi Loading required package: DBI Loading required package: RSQLite Loading required package: GO Attaching package: 'goTools' The following object(s) are masked from package:annotate : getGOTerm Error: processing vignette 'goTools.Rnw' failed with diagnostics: chunk 5 Error in file(file, "r") : unable to open connection In addition: Warning message: In file(file, "r") : cannot open: HTTP status was '404 Not Found' Execution halted