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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 79/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
gaggle1.5.0Paul ShannonLast Changed Date: 2007-04-24 12:49:14 -0700 Last Changed Rev: 24221 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | [ OK ] | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | ERROR | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
Package: gaggle |
Version: 1.5.0 |
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check gaggle_1.5.0.tar.gz |
RetCode: 0 |
Time: 23.5 seconds |
Status: OK |
CheckDir: gaggle.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/home/biocbuild/bbs-2.1-bioc/meat/gaggle.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-08-06 r42439) * checking for file 'gaggle/DESCRIPTION' ... OK * this is package 'gaggle' version '1.5.0' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'gaggle' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE broadcast: no visible binding for global variable 'goose' .broadcastAssociativeArray: no visible binding for global variable 'goose' .broadcastEnvironment: no visible binding for global variable 'goose' .broadcastGraph: no visible binding for global variable 'goose' gaggleInit: no visible binding for '<<-' assignment to 'goose' gaggleInit: no visible binding for '<<-' assignment to 'targetGoose' gaggleInit: no visible binding for global variable 'goose' geese: no visible binding for global variable 'goose' getCluster: no visible binding for global variable 'goose' getHashMap: no visible binding for global variable 'goose' getMatrix: no visible binding for global variable 'goose' getNameList: no visible binding for global variable 'goose' getNetwork: no visible binding for global variable 'goose' getSpecies: no visible binding for global variable 'goose' getTargetGoose: no visible binding for global variable 'goose' hideGoose: no visible binding for global variable 'goose' setSpecies: no visible binding for global variable 'goose' setTargetGoose: no visible binding for '<<-' assignment to 'targetGoose' setTargetGoose: no visible binding for global variable 'goose' showGoose: no visible binding for global variable 'goose' testGagglePackage: no visible global function definition for 'test.gaggle' * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating gaggle-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating gaggle-manual.tex ... OK * checking gaggle-manual.tex ... OK
gaggle.Rcheck/00install.out:
* Installing *source* package 'gaggle' ... ** R ** inst ** help >>> Building/Updating help pages for package 'gaggle' Formats: text html latex example broadcast text html latex gaggleInit text html latex geese text html latex getCluster text html latex getHashMap text html latex getMatrix text html latex getNameList text html latex getNetwork text html latex getSpecies text html latex getTargetGoose text html latex hideGoose text html latex setSpecies text html latex setTargetGoose text html latex showGoose text html latex testGagglePackage text html latex ** building package indices ... * DONE (gaggle)