Back to the "Multiple platform build/check report"
IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 16/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
annaffy1.9.1Colin A. SmithLast Changed Date: 2007-06-10 17:26:20 -0700 Last Changed Rev: 25308 | lamb1 | Linux (SUSE 10.1) | x86_64 | ERROR | skipped | |
wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | ERROR | skipped | skipped | |
pitt | Mac OS X (10.4.10) | i386 | [ ERROR ] | skipped | skipped |
Package: annaffy |
Version: 1.9.1 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build annaffy |
RetCode: 1 |
Time: 14.0 seconds |
Status: ERROR |
PackageFile: None |
* checking for file 'annaffy/DESCRIPTION' ... OK * preparing 'annaffy': * checking DESCRIPTION meta-information ... OK * installing the package to re-build vignettes * Installing *source* package 'annaffy' ... ** R ** data ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: GO Loading required package: KEGG ** help >>> Building/Updating help pages for package 'annaffy' Formats: text html latex example aaf.character text html latex aaf.goterm text html latex aaf.handler text html latex aaf.integer text html latex aaf.raw text html latex aafChromLoc-class text html latex aafChromLoc text html latex example aafChromosome-class text html latex aafChromosome text html latex example aafCytoband-class text html latex aafCytoband text html latex example aafDescription-class text html latex aafDescription text html latex example aafExpr text html latex aafFunction-class text html latex aafFunction text html latex example aafGO-class text html latex aafGO text html latex example aafGOItem-class text html latex aafGenBank-class text html latex aafGenBank text html latex example aafIntensity-class text html latex aafList-class text html latex aafLocusLink-class text html latex aafLocusLink text html latex example aafPathway-class text html latex aafPathway text html latex example aafPathwayItem-class text html latex aafProbe-class text html latex aafProbe text html latex example aafPubMed-class text html latex aafPubMed text html latex example aafSearchGO text html latex aafSearchText text html latex example aafSigned-class text html latex aafSymbol-class text html latex aafSymbol text html latex example aafTable-class text html latex aafTable text html latex aafTableAnn text html latex aafTableFrame text html latex aafTableInt text html latex aafUniGene-class text html latex aafUniGene text html latex example chkPkgs text html latex getCSS-methods text html latex getHTML-methods text html latex getTD-methods text html latex getText-methods text html latex getURL-methods text html latex is.annpkg text html latex example selectorWidget text html latex ** building package indices ... * DONE (annaffy) * creating vignettes ... ERROR Loading required package: Biobase Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: GO Loading required package: KEGG Loading required package: AnnotationDbi Loading required package: DBI Loading required package: RSQLite Loading required package: hgu95av2.db Error: processing vignette 'annaffy.Rnw' failed with diagnostics: chunk 4 Error in sqliteExecStatement(con, statement, bind.data) : RS-DBI driver: (error in statement: near ",": syntax error) In addition: Warning message: In if (!is.na(L2Rlink@tagname)) L2Rlink@tagname : the condition has length > 1 and only the first element will be used Execution halted