Back to the "Multiple platform build/check report"
IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 12/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
affypdnn1.11.0Laurent GautierLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | [ OK ] | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
Package: affypdnn |
Version: 1.11.0 |
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check affypdnn_1.11.0.tar.gz |
RetCode: 0 |
Time: 282.3 seconds |
Status: OK |
CheckDir: affypdnn.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory 'E:/biocbld/bbs-2.1-bioc/meat/affypdnn.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-08-06 r42439) * checking for file 'affypdnn/DESCRIPTION' ... OK * this is package 'affypdnn' version '1.11.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'affypdnn' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE S3 methods shown with full name in documentation object 'transform.ProbeSet': transform.ProbeSet The \usage entries for S3 methods should use the \method markup and not their full name. See the chapter 'Writing R documentation files' in manual 'Writing R Extensions'. * checking data for non-ASCII characters ... OK * creating affypdnn-Ex.R ... OK * checking examples ... OK * creating affypdnn-manual.tex ... OK * checking affypdnn-manual.tex ... OK
affypdnn.Rcheck/00install.out:
installing R.css in E:/biocbld/bbs-2.1-bioc/meat/affypdnn.Rcheck ---------- Making package affypdnn ------------ adding build stamp to DESCRIPTION installing R files installing inst files installing data files installing man source files installing indices not zipping data installing help >>> Building/Updating help pages for package 'affypdnn' Formats: text html latex example chm chiptype.pdnn.params text html latex example chm expressopdnn text html latex example chm find.params.pdnn text html latex example chm generateExprVal.method.pdnn text html latex example chm matplotProbesPDNN text html latex example chm pdnn.params.chiptype text html latex example chm transform.ProbeSet text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling e:\biocbld\bbs-2.1-bioc\meat\affypdnn.Rcheck\00_pkg_src\affypdnn\chm\affypdnn.chm Compile time: 0 minutes, 0 seconds 8 Topics 31 Local links 0 Internet links 1 Graphic Created e:\biocbld\bbs-2.1-bioc\meat\affypdnn.Rcheck\00_pkg_src\affypdnn\chm\affypdnn.chm, 27,587 bytes Compression decreased file by 8,298 bytes. adding MD5 sums * DONE (affypdnn)