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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 8/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
affycoretools1.9.4James W. MacDonaldLast Changed Date: 2007-08-07 09:44:41 -0700 Last Changed Rev: 26215 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | WARNINGS | |
wellington | Linux (SUSE 9.2) | i686 | OK | WARNINGS | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | [ OK ] | WARNINGS | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | WARNINGS | OK |
Package: affycoretools |
Version: 1.9.4 |
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build affycoretools |
RetCode: 0 |
Time: 72.4 seconds |
Status: OK |
PackageFile: affycoretools_1.9.4.tar.gz |
* checking for file 'affycoretools/DESCRIPTION' ... OK * preparing 'affycoretools': * checking DESCRIPTION meta-information ... OK * installing the package to re-build vignettes installing R.css in E:/biocbld/bbs-2.1-bioc/tmpdir/Rinst238427947 ---------- Making package affycoretools ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata installing R files installing inst files installing man source files installing indices installing help >>> Building/Updating help pages for package 'affycoretools' Formats: text html latex example chm affystart text html latex chm annBM text html latex example chm convert.back text html latex chm extractStats text html latex chm foldFilt text html latex chm foldFiltBM text html latex chm getCols text html latex chm getIndex text html latex chm getOrder text html latex chm getSymbol text html latex chm getUniqueLL text html latex chm getans text html latex chm houtSig text html latex chm hyperG2annaffy text html latex chm hyperGoutput text html latex chm intNames text html latex chm limma2annaffy text html latex chm limma2biomaRt text html latex chm make.cl text html latex chm makeFCList text html latex chm makeIndices text html latex chm pca.legend text html latex chm plotDeg text html latex example chm plotMA text html latex chm plotPCA text html latex chm probes2table text html latex chm probes2tableBM text html latex chm tableFilt text html latex chm vennCounts2 text html latex example chm vennSelect text html latex chm vennSelectBM text html latex chm vennSelectFC text html latex chm Microsoft HTML Help Compiler 4.74.8702 Compiling e:\biocbld\bbs-2.1-bioc\meat\affycoretools\chm\affycoretools.chm Compile time: 0 minutes, 1 second 33 Topics 53 Local links 0 Internet links 1 Graphic Created e:\biocbld\bbs-2.1-bioc\meat\affycoretools\chm\affycoretools.chm, 63,128 bytes Compression decreased file by 80,669 bytes. preparing package affycoretools for lazy loading Loading required package: affy Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: affyio Loading required package: preprocessCore Loading required package: limma Loading required package: GOstats Loading required package: graph Loading required package: GO.db Loading required package: AnnotationDbi Loading required package: DBI Loading required package: RSQLite Loading required package: annotate Loading required package: RBGL Loading required package: Category Loading required package: genefilter Loading required package: survival Loading required package: splines Loading required package: biomaRt Loading required package: XML Attaching package: 'XML' The following object(s) are masked from package:graph : addNode Loading required package: RCurl Attaching package: 'biomaRt' The following object(s) are masked from package:annotate : getGO Loading required package: gcrma Loading required package: matchprobes Loading required package: xtable Loading required package: annaffy Loading required package: GO Attaching package: 'GO' The following object(s) are masked from package:GO.db : GOBPANCESTOR, GOBPCHILDREN, GOBPOFFSPRING, GOBPPARENTS, GOCCANCESTOR, GOCCCHILDREN, GOCCOFFSPRING, GOCCPARENTS, GOMAPCOUNTS, GOMFANCESTOR, GOMFCHILDREN, GOMFOFFSPRING, GOMFPARENTS, GOOBSOLETE, GOSYNONYM, GOTERM Loading required package: KEGG adding MD5 sums * DONE (affycoretools) * creating vignettes ... OK * removing junk files * checking for LF line-endings in source files * checking for empty or unneeded directories * building 'affycoretools_1.9.4.tar.gz'