Back to the "Multiple platform build/check report"
IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 109/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
HEM1.9.0HyungJun ChoLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | [ OK ] | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
Package: HEM |
Version: 1.9.0 |
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check HEM_1.9.0.tar.gz |
RetCode: 0 |
Time: 31.7 seconds |
Status: OK |
CheckDir: HEM.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/home/biocbuild/bbs-2.1-bioc/meat/HEM.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-08-06 r42439) * checking for file 'HEM/DESCRIPTION' ... OK * this is package 'HEM' version '1.9.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'HEM' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $BLAS_LIBS ... OK * creating HEM-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating HEM-manual.tex ... OK * checking HEM-manual.tex ... OK
HEM.Rcheck/00install.out:
* Installing *source* package 'HEM' ... ** libs gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c hem.c -o hem.o gcc -std=gnu99 -shared -L/usr/local/lib64 -o HEM.so hem.o -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR ** R ** data ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. ** help >>> Building/Updating help pages for package 'HEM' Formats: text html latex example am.tran text html latex am.tran.half text html latex base.ASE.Olig text html latex base.PSE.Olig text html latex base.error.Olig text html latex base.error.Olig.quanOnly text html latex boot.base.ASE.Olig text html latex boot.base.PSE.Olig text html latex boot.base.error.Olig text html latex fixbound.predict.smooth.spline text html latex hem text html latex example hem.eb.prior text html latex example hem.fdr text html latex example hem.null.no text html latex hem.null.one text html latex hem.null.two text html latex hem.preproc text html latex example mubcp text html latex nonpar.error.Olig text html latex nonpar.no.error.Olig text html latex nonpar.rep.error.Olig text html latex par.error.Olig text html latex par.no.error.Olig text html latex par.rep.error.Olig text html latex pbrain text html latex permut text html latex quant.norm text html latex quant.normal text html latex quant.normal2 text html latex quant.normalize text html latex remove.sig.genes text html latex ** building package indices ... * DONE (HEM)