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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 87/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
GeneRfold0.1.3Antoine LucasLast Changed Date: 2007-06-10 10:22:32 -0700 Last Changed Rev: 25301 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | [ OK ] | |
wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | ERROR | skipped | skipped | |
pitt | Mac OS X (10.4.10) | i386 | ERROR | skipped | skipped |
Package: GeneRfold |
Version: 0.1.3 |
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check GeneRfold_0.1.3.tar.gz |
RetCode: 0 |
Time: 12.6 seconds |
Status: OK |
CheckDir: GeneRfold.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/home/biocbuild/bbs-2.1-bioc/meat/GeneRfold.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-08-06 r42439) * checking for file 'GeneRfold/DESCRIPTION' ... OK * this is package 'GeneRfold' version '0.1.3' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'GeneRfold' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating GeneRfold-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating GeneRfold-manual.tex ... OK * checking GeneRfold-manual.tex ... OK
GeneRfold.Rcheck/00install.out:
* Installing *source* package 'GeneRfold' ... checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ANSI C... none needed checking for main in -lRNA... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include/ -fPIC -Wno-conversion -I/usr/local/include -fpic -g -O2 -Wall -c viennaR.c -o viennaR.o gcc -std=gnu99 -shared -L/usr/local/lib64 -o GeneRfold.so viennaR.o -L/usr/local/lib/ -lRNA -fPIC -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR ** R ** inst ** help >>> Building/Updating help pages for package 'GeneRfold' Formats: text html latex example fold text html latex example rnaplot text html latex example ** building package indices ... * DONE (GeneRfold)