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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 19/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
AnnotationDbi0.1.3Biocore Team c/o BioC user listLast Changed Date: 2007-08-26 00:44:31 -0700 Last Changed Rev: 26654 | lamb1 | Linux (SUSE 10.1) | x86_64 | [ ERROR ] | skipped | |
wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | ERROR | skipped | skipped | |
pitt | Mac OS X (10.4.10) | i386 | ERROR | skipped | skipped |
Package: AnnotationDbi |
Version: 0.1.3 |
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD build AnnotationDbi |
RetCode: 1 |
Time: 15.5 seconds |
Status: ERROR |
PackageFile: None |
* checking for file 'AnnotationDbi/DESCRIPTION' ... OK * preparing 'AnnotationDbi': * checking DESCRIPTION meta-information ... OK * installing the package to re-build vignettes * Installing *source* package 'AnnotationDbi' ... ** R ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: DBI Loading required package: RSQLite Creating a new generic function for "ncol" in "AnnotationDbi" Creating a new generic function for "colnames" in "AnnotationDbi" Creating a new generic function for "subset" in "AnnotationDbi" Creating a new generic function for "nrow" in "AnnotationDbi" Creating a new generic function for "head" in "AnnotationDbi" Creating a new generic function for "tail" in "AnnotationDbi" Creating a new generic function for "toString" in "AnnotationDbi" Creating a new generic function for "rev" in "AnnotationDbi" Creating a new generic function for "ls" in "AnnotationDbi" Creating a new generic function for "as.list" in "AnnotationDbi" Creating a new generic function for "mget" in "AnnotationDbi" Creating a new generic function for "eapply" in "AnnotationDbi" Creating a new generic function for "get" in "AnnotationDbi" Creating a new generic function for "exists" in "AnnotationDbi" Creating a new generic function for "sample" in "AnnotationDbi" ** help >>> Building/Updating help pages for package 'AnnotationDbi' Formats: text html latex example AnnDbPkgSeed-class text html latex example Bimap-direction text html latex example missing link(s): Bimap Bimap-keys text html latex example missing link(s): Bimap GONode-class text html latex example makeAnnDbPkg text html latex example make_eg_to_go_map text html latex example ** building package indices ... * DONE (AnnotationDbi) * creating vignettes ... ERROR Loading required package: AnnotationDbi Loading required package: Biobase Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: DBI Loading required package: RSQLite Error: processing vignette 'AnnDbMapDemo.Rnw' failed with diagnostics: chunk 11 (label=toTable) Error in sqliteExecStatement(con, statement, bind.data) : RS-DBI driver: (error in statement: near ",": syntax error) In addition: Warning message: In if (!is.na(L2Rlink@tagname)) L2Rlink@tagname : the condition has length > 1 and only the first element will be used Execution halted