BioC 2.1: CHECK report for impute on churchill

* checking for working latex ... OK
* using log directory '/loc/biocbuild/bbs-2.1-bioc/meat/impute.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-06-03 r41797)
* checking for file 'impute/DESCRIPTION' ... OK
* this is package 'impute' version '1.9.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'impute' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
impute.knn: no visible binding for global variable '.Random.seed'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking for CRLF line endings in C/C++/Fortran sources/headers ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating impute-Ex.R ... OK
* checking examples ... OK
* creating impute-manual.tex ... OK
* checking impute-manual.tex ... OK

* Installing *source* package 'impute' ...
** libs
gfortran   -fPIC  -g -O2 -Wall -c knnimpute.f -o knnimpute.o
knnimpute.f: In function 'twomis':
knnimpute.f:132: warning: 'dold' may be used uninitialized in this function
gcc -std=gnu99 -G -L/usr/local/lib -o impute.so knnimpute.o  -lgfortran -lm -L/loc/biocbuild/bbs-2.1-bioc/R/lib -lR
** R
** data
** help
 >>> Building/Updating help pages for package 'impute'
     Formats: text html latex example 
  impute.knn                        text    html    latex   example
  khanmiss                          text    html    latex   example
** building package indices ...
* DONE (impute)

Package 111/238	Hostname	OS	Arch	BUILD	CHECK	BUILD BIN
impute 1.9.0 Balasubramanian Narasimhan Last Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217	lamb1	Linux (SUSE 10.1)	x86_64	OK	OK
	wellington	Linux (SUSE 9.2)	i686	OK	OK
	churchill	Solaris 2.9	sparc	OK	[ OK ]
	lemming	Windows Server 2003 (32-bit)	x64	OK	OK	skipped

impute

1.9.0

Command output