BioC 2.1: BUILD report for goTools on churchill

* checking for file 'goTools/DESCRIPTION' ... OK
* preparing 'goTools':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
* Installing *source* package 'goTools' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: GO
** help
 >>> Building/Updating help pages for package 'goTools'
     Formats: text html latex example 
  EndNodeList                       text    html    latex   example
  goTools-internal                  text    html    latex
  ontoCompare                       text    html    latex   example
  probeID                           text    html    latex
** building package indices ...
* DONE (goTools)
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: GO

Attaching package: 'goTools'


	The following object(s) are masked from package:annotate :

	 getGOTerm 


Error: processing vignette 'goTools.Rnw' failed with diagnostics:
 chunk 5 
Error in file(file, "r") : unable to open connection
In addition: Warning message:
In file(file, "r") : unable to connect to 'arrays.ucsf.edu' on port 80.
Execution halted

Package 97/238	Hostname	OS	Arch	BUILD	CHECK	BUILD BIN
goTools 1.9.0 Agnes Paquet Last Changed Date: 2007-05-11 21:56:41 -0700 Last Changed Rev: 24616	lamb1	Linux (SUSE 10.1)	x86_64	ERROR	skipped
	wellington	Linux (SUSE 9.2)	i686	ERROR	skipped
	churchill	Solaris 2.9	sparc	[ ERROR ]	skipped
	lemming	Windows Server 2003 (32-bit)	x64	ERROR	skipped	skipped

goTools

1.9.0

Command output