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NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier |
Package 119/238 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
LMGene1.7.0John TillinghastLast Changed Date: 2007-05-25 23:04:00 -0700 Last Changed Rev: 24997 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
churchill | Solaris 2.9 | sparc | OK | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | [ OK ] | skipped |
Package: LMGene |
Version: 1.7.0 |
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check LMGene_1.7.0.tar.gz |
RetCode: 0 |
Time: 270.6 seconds |
Status: OK |
CheckDir: LMGene.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory 'D:/biocbld/bbs-2.1-bioc/meat/LMGene.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-06-03 r41797) * checking for file 'LMGene/DESCRIPTION' ... OK * this is package 'LMGene' version '1.7.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'LMGene' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * creating LMGene-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating LMGene-manual.tex ... OK * checking LMGene-manual.tex ... OK
LMGene.Rcheck/00install.out:
installing R.css in D:/biocbld/bbs-2.1-bioc/meat/LMGene.Rcheck ---------- Making package LMGene ------------ adding build stamp to DESCRIPTION installing R files installing inst files installing data files installing man source files installing indices not zipping data installing help >>> Building/Updating help pages for package 'LMGene' Formats: text html latex example chm GetLMObj text html latex example chm LMGene text html latex example chm genediff text html latex example chm glog text html latex example chm jggrad2 text html latex example chm jglog text html latex example chm lnorm text html latex example chm lnormeS text html latex example chm mlm2lm text html latex example chm msa text html latex example chm msecalc text html latex example chm msecalcmult text html latex example chm neweS text html latex example chm norm text html latex example chm psmeans text html latex example chm pvadjust text html latex example chm rowaov text html latex example chm rowlist text html latex example chm sample.eS text html latex example chm sample.ind text html latex example chm sample.mat text html latex example chm tranest text html latex example chm tranest2 text html latex example chm tranestmult text html latex example chm transeS text html latex example chm vlist text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\bbs-2.1-bioc\meat\LMGene.Rcheck\00_pkg_src\LMGene\chm\LMGene.chm Compile time: 0 minutes, 0 seconds 27 Topics 109 Local links 19 Internet links 1 Graphic Created d:\biocbld\bbs-2.1-bioc\meat\LMGene.Rcheck\00_pkg_src\LMGene\chm\LMGene.chm, 38,419 bytes Compression decreased file by 40,650 bytes. adding MD5 sums * DONE (LMGene)