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NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier
Package 18/238HostnameOSArchBUILDCHECKBUILD BIN

AnnotationDbi

0.0.78

Biocore Team
Last Changed Date: 2007-06-08 19:33:06 -0700
Last Changed Rev: 25290
lamb1 Linux (SUSE 10.1) x86_64  OK  WARNINGS 
wellington Linux (SUSE 9.2) i686  OK  WARNINGS 
churchill Solaris 2.9 sparc  OK  WARNINGS 
lemming Windows Server 2003 (32-bit) x64 [ OK ] WARNINGS skipped
Package: AnnotationDbi
Version: 0.0.78
Command: D:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD build AnnotationDbi
RetCode: 0
Time: 43.5 seconds
Status: OK
PackageFile: AnnotationDbi_0.0.78.tar.gz

Command output

* checking for file 'AnnotationDbi/DESCRIPTION' ... OK
* preparing 'AnnotationDbi':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.1-bioc/tmpdir/Rinst445265887


---------- Making package AnnotationDbi ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'AnnotationDbi'
     Formats: text html latex example chm 
  AnnDbPkgSeed-class                text    html    latex   example chm
  GONode-class                      text    html    latex   example chm
  makeAnnDbPkg                      text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.1-bioc\meat\AnnotationDbi\chm\AnnotationDbi.chm





Compile time: 0 minutes, 0 seconds

4	Topics

28	Local links

1	Internet link

1	Graphic





Created d:\biocbld\bbs-2.1-bioc\meat\AnnotationDbi\chm\AnnotationDbi.chm, 19,750 bytes

Compression increased file by 574 bytes.

  preparing package AnnotationDbi for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DBI
Loading required package: RSQLite
Creating a new generic function for "ncol" in "AnnotationDbi"
Creating a new generic function for "colnames" in "AnnotationDbi"
Creating a new generic function for "nrow" in "AnnotationDbi"
Creating a new generic function for "head" in "AnnotationDbi"
Creating a new generic function for "tail" in "AnnotationDbi"
Creating a new generic function for "toString" in "AnnotationDbi"
Creating a new generic function for "rev" in "AnnotationDbi"
Creating a new generic function for "ls" in "AnnotationDbi"
Creating a new generic function for "as.list" in "AnnotationDbi"
Creating a new generic function for "mget" in "AnnotationDbi"
Creating a new generic function for "eapply" in "AnnotationDbi"
Creating a new generic function for "get" in "AnnotationDbi"
Creating a new generic function for "exists" in "AnnotationDbi"
Creating a new generic function for "sample" in "AnnotationDbi"
  adding MD5 sums

* DONE (AnnotationDbi)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/AFFYHUEXDB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/GODB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/HGU95AV2DB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/LLMAPPINGSDB/inst/extdata' is empty
WARNING: directory 'AnnotationDbi/inst/AnnDbPkg-templates/YEASTDB/inst/extdata' is empty
* building 'AnnotationDbi_0.0.78.tar.gz'