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Package 136/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
metaArray1.11.0Hyungwon ChoiLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | [ OK ] | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
churchill | Solaris 2.9 | sparc | OK | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | OK | OK |
Package: metaArray |
Version: 1.11.0 |
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check metaArray_1.11.0.tar.gz |
RetCode: 0 |
Time: 33.5 seconds |
Status: OK |
CheckDir: metaArray.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/home/biocbuild/bbs-2.1-bioc/meat/metaArray.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-05-03 r41426) * checking for file 'metaArray/DESCRIPTION' ... OK * this is package 'metaArray' version '1.11.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'metaArray' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE poe.mcmc: no visible binding for global variable 'R0' * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating metaArray-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating metaArray-manual.tex ... OK * checking metaArray-manual.tex ... OK
metaArray.Rcheck/00install.out:
* Installing *source* package 'metaArray' ... ** libs gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -DUSEDOUBLE -fpic -g -O2 -Wall -c contr.c -o contr.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -DUSEDOUBLE -fpic -g -O2 -Wall -c dproc2.c -o dproc2.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -DUSEDOUBLE -fpic -g -O2 -Wall -c dproc.c -o dproc.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -DUSEDOUBLE -fpic -g -O2 -Wall -c intcor.c -o intcor.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -DUSEDOUBLE -fpic -g -O2 -Wall -c lowess.c -o lowess.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -DUSEDOUBLE -fpic -g -O2 -Wall -c mmath.c -o mmath.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -DUSEDOUBLE -fpic -g -O2 -Wall -c perm.c -o perm.o gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -DUSEDOUBLE -fpic -g -O2 -Wall -c poe.c -o poe.o poe.c: In function 'poe_one_iter': poe.c:431: warning: suggest parentheses around comparison in operand of & poe.c:437: warning: suggest parentheses around comparison in operand of & poe.c:438: warning: suggest parentheses around comparison in operand of | gcc -std=gnu99 -shared -L/usr/local/lib64 -o metaArray.so contr.o dproc2.o dproc.o intcor.o lowess.o mmath.o perm.o poe.o -lm -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR ** R ** data ** inst ** help >>> Building/Updating help pages for package 'metaArray' Formats: text html latex example Zscore text html latex example em.draw text html latex example find.init text html latex example fit.em text html latex example intcor text html latex example logit text html latex mdata text html latex poe.em text html latex example poe.mcmc text html latex example ** building package indices ... * DONE (metaArray)