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Package 32/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
biocViews1.5.0Seth FalconLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | [ OK ] | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
churchill | Solaris 2.9 | sparc | ERROR | skipped | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | OK | OK |
Package: biocViews |
Version: 1.5.0 |
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD check biocViews_1.5.0.tar.gz |
RetCode: 0 |
Time: 30.6 seconds |
Status: OK |
CheckDir: biocViews.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/home/biocbuild/bbs-2.1-bioc/meat/biocViews.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-05-03 r41426) * checking for file 'biocViews/DESCRIPTION' ... OK * this is package 'biocViews' version '1.5.0' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'biocViews' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE writeTopLevelView: no visible binding for global variable 'biocViewsVocab' * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * creating biocViews-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating biocViews-manual.tex ... OK * checking biocViews-manual.tex ... OK
biocViews.Rcheck/00install.out:
* Installing *source* package 'biocViews' ... ** R ** data ** inst ** preparing package for lazy loading Loading required package: tools Loading required package: graph Loading required package: RBGL Loading required package: XML Attaching package: 'XML' The following object(s) are masked from package:graph : addNode ** help >>> Building/Updating help pages for package 'biocViews' Formats: text html latex example BiocView-class text html latex Htmlized-class text html latex PackageDetail-class text html latex example RepositoryDetail-class text html latex biocViewsVocab text html latex example extractVignettes text html latex genReposControlFiles text html latex getBiocSubViews text html latex example getBiocViews text html latex example getPacksAndViews text html latex getSubTerms text html latex example htmlDoc text html latex htmlFilename text html latex htmlValue text html latex writeBiocViews text html latex writeHtmlDoc text html latex writePackageDetailHtml text html latex writeRepositoryHtml text html latex writeTopLevelView text html latex write_REPOSITORY text html latex write_SYMBOLS text html latex write_VIEWS text html latex ** building package indices ... * DONE (biocViews)