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Package 15/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
annaffy1.9.0Colin A. SmithLast Changed Date: 2007-05-11 21:56:41 -0700 Last Changed Rev: 24616 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | OK | [ OK ] | ||
churchill | Solaris 2.9 | sparc | OK | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | OK | OK |
Package: annaffy |
Version: 1.9.0 |
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check annaffy_1.9.0.tar.gz |
RetCode: 0 |
Time: 446.4 seconds |
Status: OK |
CheckDir: annaffy.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/annaffy.Rcheck' * using R version 2.6.0 Under development (unstable) (2007-04-17 r41210) * checking for file 'annaffy/DESCRIPTION' ... OK * this is package 'annaffy' version '1.9.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'annaffy' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * creating annaffy-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating annaffy-manual.tex ... OK * checking annaffy-manual.tex ... OK
annaffy.Rcheck/00install.out:
* Installing *source* package 'annaffy' ... ** R ** data ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: GO Loading required package: KEGG ** help >>> Building/Updating help pages for package 'annaffy' Formats: text html latex example aaf.character text html latex aaf.goterm text html latex aaf.handler text html latex aaf.integer text html latex aaf.raw text html latex aafChromLoc-class text html latex aafChromLoc text html latex example aafChromosome-class text html latex aafChromosome text html latex example aafCytoband-class text html latex aafCytoband text html latex example aafDescription-class text html latex aafDescription text html latex example aafExpr text html latex aafFunction-class text html latex aafFunction text html latex example aafGO-class text html latex aafGO text html latex example aafGOItem-class text html latex aafGenBank-class text html latex aafGenBank text html latex example aafIntensity-class text html latex aafList-class text html latex aafLocusLink-class text html latex aafLocusLink text html latex example aafPathway-class text html latex aafPathway text html latex example aafPathwayItem-class text html latex aafProbe-class text html latex aafProbe text html latex example aafPubMed-class text html latex aafPubMed text html latex example aafSearchGO text html latex aafSearchText text html latex example aafSigned-class text html latex aafSymbol-class text html latex aafSymbol text html latex example aafTable-class text html latex aafTable text html latex aafTableAnn text html latex aafTableFrame text html latex aafTableInt text html latex aafUniGene-class text html latex aafUniGene text html latex example chkPkgs text html latex getCSS-methods text html latex getHTML-methods text html latex getTD-methods text html latex getText-methods text html latex getURL-methods text html latex is.annpkg text html latex example selectorWidget text html latex ** building package indices ... * DONE (annaffy)