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Package 202/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
SAGx1.11.0Per BrobergLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | WARNINGS | |
wellington | Linux (SUSE 9.2) | i686 | OK | OK | ||
churchill | Solaris 2.9 | sparc | [ OK ] | OK | ||
lemming | Windows Server 2003 (32-bit) | x64 | OK | OK | OK |
Package: SAGx |
Version: 1.11.0 |
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build SAGx |
RetCode: 0 |
Time: 77.9 seconds |
Status: OK |
PackageFile: SAGx_1.11.0.tar.gz |
* checking for file 'SAGx/DESCRIPTION' ... OK * preparing 'SAGx': * checking DESCRIPTION meta-information ... OK * cleaning src * checking whether 'INDEX' is up-to-date ... NO * use '--force' to overwrite the existing 'INDEX' * installing the package to re-build vignettes * Installing *source* package 'SAGx' ... ** libs gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fPIC -g -O2 -Wall -c minigsea.c -o minigsea.o gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fPIC -g -O2 -Wall -c newboot.c -o newboot.o gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fPIC -g -O2 -Wall -c samrocNboot.c -o samrocNboot.o gcc -std=gnu99 -G -L/usr/local/lib -o SAGx.so minigsea.o newboot.o samrocNboot.o -L/loc/biocbuild/bbs-2.1-bioc/R/lib -lR ** R ** inst ** preparing package for lazy loading Loading required package: multtest Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: survival Loading required package: splines ** help >>> Building/Updating help pages for package 'SAGx' Formats: text html latex example Fstat text html latex example GSEA.mean.t text html latex JT.test text html latex example R2BASE text html latex R2mim text html latex Xprep text html latex Xprep.resid text html latex clin2mim text html latex cluster.q text html latex estimatep0 text html latex fetchSignal text html latex example firstpass text html latex example fom text html latex fp.fn text html latex gap text html latex example list.experiments text html latex example list.intersection.p text html latex mat2TeX text html latex myclus text html latex example normalise text html latex one.probeset.per.gene text html latex outlier text html latex example p0.mom text html latex pava.fdr text html latex pava text html latex example rank.genes text html latex rank.trend text html latex example rsd.test text html latex samroc.result-class text html latex samrocn text html latex samrocnboot text html latex example union.of.pways text html latex example ** building package indices ... * DONE (SAGx) * creating vignettes ... OK * cleaning src * removing junk files * checking for LF line-endings in source files * checking for empty or unneeded directories * building 'SAGx_1.11.0.tar.gz'