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Package 102/208OSArchBUILDCHECKBUILD BIN

LMGene

1.5.0

John Tillinghast		Linux (SUSE 9.2) x86_64 ERROR skipped
Linux (SUSE 10.1) x86_64 ERROR skipped
Linux (SUSE 9.2) i686[ ERROR ]skipped
Solaris 2.9 sparc ERROR skipped
Windows Server 2003 x86_64 ERROR skippedskipped
Windows Server 2003 NA ERROR skippedskipped
Mac OS X (10.4.6) i686 ERROR skipped
Package: LMGene
Version: 1.5.0
Command: /loc/biocbuild/2.0d/R/bin/R CMD build LMGene
RetCode: 1
Time: 12.8 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'LMGene/DESCRIPTION' ... OK
* preparing 'LMGene':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'LMGene' ...
** R
** data
** inst
** help
 >>> Building/Updating help pages for package 'LMGene'
     Formats: text html latex example 
  LMGene                            text    html    latex   example
  genediff                          text    html    latex   example
  glog                              text    html    latex   example
  jggrad2                           text    html    latex   example
  jglog                             text    html    latex   example
  lnorm                             text    html    latex   example
  mlm2lm                            text    html    latex   example
  msa                               text    html    latex   example
  msecalc                           text    html    latex   example
  neweS                             text    html    latex   example
  norm                              text    html    latex   example
  pvadjust                          text    html    latex   example
  rowaov                            text    html    latex   example
  rowlist                           text    html    latex   example
  tranest                           text    html    latex   example
  tranest2                          text    html    latex   example
  vlist                             text    html    latex   example
** building package indices ...
* DONE (LMGene)
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: multtest
Loading required package: survival
Loading required package: splines
Warning message:
data set 'sample.eS' not found in: data(sample.eS) 

Error:  chunk 3 
Error in .class1(object) : object "sample.eS" not found
Error in buildVignettes(dir = ".") : Error:  chunk 3 
Error in .class1(object) : object "sample.eS" not found
Execution halted