0.99.29Benilton Carvalho | Linux (SUSE 9.2) | x86_64 | OK | WARNINGS | |
| Linux (SUSE 10.1) | x86_64 | OK | WARNINGS | |
| Linux (SUSE 9.2) | i686 | OK | WARNINGS | |
| Solaris 2.9 | sparc | OK | WARNINGS | |
| Windows Server 2003 | x86_64 | OK | WARNINGS | [ OK ] |
| Windows Server 2003 | NA | OK | ERROR | OK |
| Mac OS X (10.4.6) | i686 | OK | WARNINGS | |
Using auto-selected zip options ' oligo-HELP=ziponly'
---------- Making package oligo ------------
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
making DLL ...
making baseProfile.d from baseProfile.c
making basecontent.d from basecontent.c
making qnorm.d from qnorm.c
making rma2.d from rma2.c
making rma_background2.d from rma_background2.c
making rma_common.d from rma_common.c
gcc -ID:/biocbld/2.0d/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/2.0d/R/include -Wall -O2 -std=gnu99 -c baseProfile.c -o baseProfile.o
baseProfile.c: In function `gcrma_getSeq2':
baseProfile.c:14: warning: unused variable `nx'
gcc -ID:/biocbld/2.0d/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/2.0d/R/include -Wall -O2 -std=gnu99 -c basecontent.c -o basecontent.o
gcc -ID:/biocbld/2.0d/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/2.0d/R/include -Wall -O2 -std=gnu99 -c qnorm.c -o qnorm.o
qnorm.c: In function `qnorm_c_determine_target':
qnorm.c:1518: warning: unused variable `ind'
qnorm.c:1519: warning: unused variable `dimat'
qnorm.c:1523: warning: unused variable `ranks'
qnorm.c: In function `R_qnorm_using_target':
qnorm.c:1599: warning: unused variable `dim2'
qnorm.c: In function `qnorm_c_determine_target':
qnorm.c:1591: warning: control reaches end of non-void function
qnorm.c: At top level:
qnorm.c:114: warning: 'min' defined but not used
qnorm.c:387: warning: 'qnorm_c_old' defined but not used
qnorm.c:461: warning: 'qnorm_robust_c_old' defined but not used
gcc -ID:/biocbld/2.0d/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/2.0d/R/include -Wall -O2 -std=gnu99 -c rma2.c -o rma2.o
gcc -ID:/biocbld/2.0d/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/2.0d/R/include -Wall -O2 -std=gnu99 -c rma_background2.c -o rma_background2.o
gcc -ID:/biocbld/2.0d/R/src/extra/zlib -DHAVE_ZLIB -ID:/biocbld/2.0d/R/include -Wall -O2 -std=gnu99 -c rma_common.c -o rma_common.o
windres --include-dir D:/biocbld/2.0d/R/include -i oligo_res.rc -o oligo_res.o
gcc -shared -s -o oligo.dll oligo.def baseProfile.o basecontent.o qnorm.o rma2.o rma_background2.o rma_common.o oligo_res.o -LD:/biocbld/2.0d/R/bin -lR
... DLL made
installing DLL
installing R files
save image
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()' or start with 'help(Biobase)'. For details
on reading vignettes, see the openVignette help page.
Loading required package: affyio
Loading required package: splines
Creating a new generic function for "hist" in "oligo"
Creating a new generic function for "boxplot" in "oligo"
Creating a new generic function for "image" in "oligo"
Creating a new generic function for "sd" in "oligo"
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'oligo'
Formats: text html latex example chm
FeatureSet-class text html latex chm
FeatureSet-methods text html latex chm
SubClasses text html latex example chm
accessors text html latex example chm
allele text html latex example chm
as.data.frame.platformDesign text html latex example chm
basecontent text html latex example chm
bg.correct text html latex chm
characterOrNULL-class text html latex chm
cleanPlatformName text html latex example chm
crlmm text html latex example chm
dimensions text html latex example chm
featureIndex text html latex chm
featureInfo text html latex chm
fileManip text html latex chm
getPlatformDesign text html latex example chm
indexFeatureSetName text html latex chm
indexTools text html latex chm
initialize-methods text html latex chm
justsnprma text html latex example chm
methods-Sequences text html latex example chm
nProbes text html latex chm
names text html latex example chm
normalize.quantiles text html latex chm
parsers text html latex example chm
platformDesign-class text html latex chm
platformDesignName text html latex chm
plotDensity text html latex example chm
probeMatch-methods text html latex example chm
probeNames-methods text html latex chm
probeNames text html latex chm
read.celfiles text html latex example chm
rma text html latex example chm
snprma text html latex example chm
zipping help files
Microsoft HTML Help Compiler 4.74.8702
Compiling d:\biocbld\2.0d\Rpacks\R.INSTALL\oligo\chm\oligo.chm
Compile time: 0 minutes, 0 seconds
35 Topics
153 Local links
2 Internet links
1 Graphic
Created d:\biocbld\2.0d\Rpacks\R.INSTALL\oligo\chm\oligo.chm, 44,696 bytes
Compression decreased file by 62,788 bytes.
adding MD5 sums
packaged installation of package 'oligo' as oligo_0.99.29.zip
* DONE (oligo)