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Package 19/208 | OS | Arch | BUILD | CHECK | BUILD BIN |
applera1.5.0Francesca Cordero | Linux (SUSE 9.2) | x86_64 | ERROR | skipped | |
Linux (SUSE 10.1) | x86_64 | ERROR | skipped | ||
Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
Solaris 2.9 | sparc | ERROR | skipped | ||
Windows Server 2003 | x86_64 | ERROR | skipped | skipped | |
Windows Server 2003 | NA | ERROR | skipped | skipped | |
Mac OS X (10.4.6) | i686 | OK | [ WARNINGS ] |
Package: applera |
Version: 1.5.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check applera_1.5.0.tar.gz |
RetCode: 0 |
Time: 82.9 seconds |
Status: WARNINGS |
CheckDir: applera.Rcheck |
Warnings: 1 |
* checking for working latex ... OK * using log directory '/Users/biocbuild/2.0d/Rpacks/applera.Rcheck' * using R version 2.5.0 Under development (unstable) (2006-10-21 r39702) * checking for file 'applera/DESCRIPTION' ... OK * this is package 'applera' version '1.5.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'applera' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating applera-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... WARNING Package vignettes without corresponding PDF: /Users/biocbuild/2.0d/Rpacks/applera.Rcheck/00_pkg_src/applera/inst/doc/applera.Rnw * creating applera-manual.tex ... OK * checking applera-manual.tex ... OK WARNING: There was 1 warning, see /Users/biocbuild/2.0d/Rpacks/applera.Rcheck/00check.log for details
applera.Rcheck/00install.out:
* Installing *source* package 'applera' ... ** R ** data ** inst ** preparing package for lazy loading Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()' or start with 'help(Biobase)'. For details on reading vignettes, see the openVignette help page. Loading required package: affy Loading required package: affyio Loading required package: genefilter Loading required package: survival Loading required package: splines Loading required package: limma Loading required package: geneplotter Loading required package: annotate Loading required package: lattice KernSmooth 2.22 installed Copyright M. P. Wand 1997 Loading required package: RColorBrewer Loading required package: prada Loading required package: grid Scalable Robust Estimators with High Breakdown Point (version 0.3-04) Loading required package: combinat Attaching package: 'combinat' The following object(s) are masked from package:utils : combn ** help >>> Building/Updating help pages for package 'applera' Formats: text html latex example CATPlots text html latex example applera text html latex example optFilter text html latex example readAp text html latex example test text html latex example ** building package indices ... * DONE (applera)