Package: ctc

Version: 1.8.0

Command: /loc/biocbuild/1.9d/R/bin/R CMD check ctc_1.8.0.tar.gz

RetCode: 0

Time: 94.6 seconds

Status: OK

CheckDir: ctc.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/loc/biocbuild/1.9d/Rpacks/ctc.Rcheck'
* using R version 2.4.0 (2006-10-03)
* checking for file 'ctc/DESCRIPTION' ... OK
* this is package 'ctc' version '1.8.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ctc' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating ctc-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating ctc-manual.tex ... OK
* checking ctc-manual.tex ... OK

* Installing *source* package 'ctc' ...
** R
** demo
** exec
** inst
** help
 >>> Building/Updating help pages for package 'ctc'
     Formats: text html latex example 
  hc2Newick                         text    html    latex   example
  hclust2treeview                   text    html    latex   example
  r2cluster                         text    html    latex   example
  r2gtr                             text    html    latex   example
  r2xcluster                        text    html    latex   example
  read.eisen                        text    html    latex
  xcluster                          text    html    latex   example
  xcluster2r                        text    html    latex   example
** building package indices ...
* DONE (ctc)