Package: diffGeneAnalysis

Version: 1.14.0

Command: /loc/biocbuild/1.8d/R/bin/R CMD check diffGeneAnalysis_1.14.0.tar.gz

RetCode: 0

Time: 22.7 seconds

Status: OK

CheckDir: diffGeneAnalysis.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/loc/biocbuild/1.8d/Rpacks/diffGeneAnalysis.Rcheck'
* using Version 2.3.1 (2006-06-01)
* checking for file 'diffGeneAnalysis/DESCRIPTION' ... OK
* this is package 'diffGeneAnalysis' version '1.14.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'diffGeneAnalysis' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking Rd files ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating diffGeneAnalysis-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating diffGeneAnalysis-manual.tex ... OK
* checking diffGeneAnalysis-manual.tex ... OK

* Installing *source* package 'diffGeneAnalysis' ...
** R
** data
** inst
** help
Warning messages:
1: incomplete final line found by readLines on './man/assocAnalysis.Rd' 
2: incomplete final line found by readLines on './man/biasAdjust.Rd' 
3: incomplete final line found by readLines on './man/dataTrim.Rd' 
4: incomplete final line found by readLines on './man/refGroup.Rd' 
 >>> Building/Updating help pages for package 'diffGeneAnalysis'
     Formats: text html latex example 
  assocAnalysis                     text    html    latex   example
  biasAdjust                        text    html    latex   example
  curveFit                          text    html    latex   example
  dataTrim                          text    html    latex   example
  normalize                         text    html    latex   example
  rawdata                           text    html    latex   example
  refGroup                          text    html    latex   example
** building package indices ...
* DONE (diffGeneAnalysis)