* checking for file 'RBGL/DESCRIPTION' ... OK
* preparing 'RBGL':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running cleanup
removing exploded boost header source...
* installing the package to re-build vignettes
* Installing *source* package 'RBGL' ...
untarring boost include tree...
** libs
g++ -I/loc/biocbuild/1.8d/R/include -I/loc/biocbuild/1.8d/R/include -I/usr/local/include -IboostIncl -fPIC -g -O2 -c bbc.cpp -o bbc.o
g++ -I/loc/biocbuild/1.8d/R/include -I/loc/biocbuild/1.8d/R/include -I/usr/local/include -IboostIncl -fPIC -g -O2 -c cliques.cpp -o cliques.o
g++ -I/loc/biocbuild/1.8d/R/include -I/loc/biocbuild/1.8d/R/include -I/usr/local/include -IboostIncl -fPIC -g -O2 -c hcs.cpp -o hcs.o
g++ -I/loc/biocbuild/1.8d/R/include -I/loc/biocbuild/1.8d/R/include -I/usr/local/include -IboostIncl -fPIC -g -O2 -c incrConnComp.cpp -o incrConnComp.o
g++ -I/loc/biocbuild/1.8d/R/include -I/loc/biocbuild/1.8d/R/include -I/usr/local/include -IboostIncl -fPIC -g -O2 -c interfaces.cpp -o interfaces.o
boostIncl/boost/graph/depth_first_search.hpp: In function 'void boost::depth_first_search(const VertexListGraph&, const boost::bgl_named_params&) [with VertexListGraph = std::vector >, std::allocator > > >, P = boost::topo_sort_visitor > > >, T = boost::graph_visitor_t, R = boost::bgl_named_params]':
boostIncl/boost/graph/topological_sort.hpp:64: instantiated from 'void boost::topological_sort(VertexListGraph&, OutputIterator, const boost::bgl_named_params&) [with VertexListGraph = std::vector >, std::allocator > > >, OutputIterator = std::back_insert_iterator > >, P = boost::identity_property_map, T = boost::vertex_index_t, R = boost::no_property]'
boostIncl/boost/graph/transitive_closure.hpp:120: instantiated from 'void boost::transitive_closure(const Graph&, GraphTC&, G_to_TC_VertexMap, VertexIndexMap) [with Graph = R_adjacency_list, GraphTC = R_adjacency_list, G_to_TC_VertexMap = boost::iterator_property_map, unsigned int>, unsigned int, unsigned int&>, VertexIndexMap = boost::vec_adj_list_vertex_id_map, unsigned int>]'
boostIncl/boost/graph/transitive_closure.hpp:263: instantiated from 'void boost::transitive_closure(const Graph&, GraphTC&) [with Graph = Graph_dd, GraphTC = Graph_dd]'
interfaces.cpp:371: instantiated from here
boostIncl/boost/graph/depth_first_search.hpp:324: error: no matching function for call to 'vertices(const std::vector >, std::allocator > > >&)'
make: *** [interfaces.o] Error 1
chmod: getting attributes of `/tmp/Rinst1826925662/RBGL/libs/*': No such file or directory
ERROR: compilation failed for package 'RBGL'
** Removing '/tmp/Rinst1826925662/RBGL'
ERROR
Installation failed.
Removing '/tmp/Rinst1826925662'