BiocFileCache
This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see BiocFileCache.
Manage Files Across Sessions
Bioconductor version: 3.11
This package creates a persistent on-disk cache of files that the user can add, update, and retrieve. It is useful for managing resources (such as custom Txdb objects) that are costly or difficult to create, web resources, and data files used across sessions.
Author: Lori Shepherd [aut, cre], Martin Morgan [aut]
Maintainer: Lori Shepherd <lori.shepherd at roswellpark.org>
citation("BiocFileCache")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BiocFileCache")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BiocFileCache")| BiocFileCache: Managing File Resources Across Sessions | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DataImport, Software |
| Version | 1.12.1 |
| In Bioconductor since | BioC 3.5 (R-3.4) (7 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.4.0), dbplyr (>= 1.0.0) |
| Imports | methods, stats, utils, dplyr, RSQLite, DBI, rappdirs, curl, httr |
| System Requirements | |
| URL | |
| Bug Reports | https://github.com/Bioconductor/BiocFileCache/issues |
See More
| Suggests | testthat, knitr, BiocStyle, rmarkdown, rtracklayer |
| Linking To | |
| Enhances | |
| Depends On Me | AnnotationHub, ExperimentHub, RcwlPipelines |
| Imports Me | AMARETTO, atSNP, BiocPkgTools, biomaRt, brendaDb, cbaf, cBioPortalData, CellBench, CTDquerier, easyRNASeq, EnrichmentBrowser, EpiTxDb, GAPGOM, GSEABenchmarkeR, HCABrowser, MBQN, netDx, org.Mxanthus.db, Organism.dplyr, PANTHER.db, psichomics, regutools, SingleCellMultiModal, tximeta, UniProt.ws, waddR |
| Suggests Me | basilisk.utils, BiocOncoTK, BiocSet, chipseqDB, fluentGenomics, HighlyReplicatedRNASeq, HumanTranscriptomeCompendium, progeny, scater, scRNAseq, seqsetvis, simpleSingleCell, structToolbox, TCGAutils, TENxBrainData, TENxPBMCData, TimeSeriesExperiment |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BiocFileCache_1.12.1.tar.gz |
| Windows Binary | BiocFileCache_1.12.1.zip |
| macOS 10.13 (High Sierra) | BiocFileCache_1.12.1.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BiocFileCache |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BiocFileCache |
| Bioc Package Browser | https://code.bioconductor.org/browse/BiocFileCache/ |
| Package Short Url | https://bioconductor.org/packages/BiocFileCache/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.11 | Source Archive |