Build/check report for BioC 3.20 - CHECK results for matter on nebbiolo2

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.4.1 (2024-06-14) -- "Race for Your Life"	4711
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for matter on nebbiolo2

To the developers/maintainers of the matter package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/matter.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: matter

Version: 2.7.8

Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:matter.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings matter_2.7.8.tar.gz

StartedAt: 2024-09-06 23:07:19 -0400 (Fri, 06 Sep 2024)

EndedAt: 2024-09-06 23:10:53 -0400 (Fri, 06 Sep 2024)

EllapsedTime: 213.5 seconds

RetCode: 0

Status: OK

CheckDir: matter.Rcheck

Warnings: 0

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:matter.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings matter_2.7.8.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/matter.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
    GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘matter/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘matter’ version ‘2.7.8’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘matter’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
* checking installed package size ... NOTE
  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    R      2.1Mb
    libs   3.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 2 NOTEs
See
  ‘/home/biocbuild/bbs-3.20-bioc/meat/matter.Rcheck/00check.log’
for details.

Installation output

matter.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL matter
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.20-bioc/R/site-library’
* installing *source* package ‘matter’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall  -c altrep.cpp -o altrep.o
In file included from atoms.h:9,
                 from matter.h:5,
                 from altrep.cpp:3:
resources.h: In member function ‘void SharedMemorySource::resize(size_t)’:
resources.h:189:51: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  189 |                         if ( shared_memory_size() < size )
      |                              ~~~~~~~~~~~~~~~~~~~~~^~~~~~
In file included from matter.h:5,
                 from altrep.cpp:3:
atoms.h: In member function ‘SEXPREC* Atoms::regroup_index(size_t)’:
atoms.h:728:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  728 |                         for ( index_t i = 0; i < ngroups; i++ )
      |                                              ~~^~~~~~~~~
atoms.h:738:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  738 |                         for ( index_t i = 0; i < ngroups; i++ )
      |                                              ~~^~~~~~~~~
In file included from altrep.cpp:3:
matter.h: In member function ‘void MatterArray::set_region(index_t, size_t, SEXP)’:
matter.h:178:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  178 |                         if ( size > XLENGTH(value) && stride != 0 ) {
      |                              ~~~~~^~~~~~~~~~~~~~~~
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:153:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |                         size = len - i > size ? size : len - i;
      |                                ~~~~~~~~^~~~~~
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:157:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:165:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:184:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   96 |                         size = len - i > size ? size : len - i;
      |                                ~~~~~~~~^~~~~~
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:187:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:193:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from atoms.h:11,
                 from matter.h:5,
                 from altrep.cpp:3:
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = int; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:572:22:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]’
drle.h:595:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  548 |         while ( i < XLENGTH(indx) && j < nruns )
      |                 ~~^~~~~~~~~~~~~~~
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = double; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:576:25:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]’
drle.h:595:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = int; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:572:22:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]’
drle.h:599:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = double; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:576:25:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]’
drle.h:599:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
In file included from matter.h:6,
                 from altrep.cpp:3:
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:153:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  189 |                         for ( index_t j = 0; j < size; j++ )
      |                                              ~~^~~~~~
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:157:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:165:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from altrep.cpp:2:
matterDefines.h: In instantiation of ‘size_t ArrayInterface::transpose_index(T*, SEXP, bool) [with T = long int; size_t = long unsigned int; SEXP = SEXPREC*]’:
matter.h:116:20:   required from ‘size_t MatterArray::get_elements(SEXP, T*, int) [with T = unsigned char; size_t = long unsigned int; SEXP = SEXPREC*]’
matter.h:209:18:   required from here
matterDefines.h:379:47: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  379 |                         for ( size_t j = 0; j < XLENGTH(indx); j++ )
      |                                             ~~^~~~~~~~~~~~~~~
In file included from matter.h:5,
                 from altrep.cpp:3:
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  356 |                         if ( pos + size >= extent(atom) )
      |                              ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  381 |                         if ( pos + size >= extent(atom) )
      |                              ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
In file included from atoms.h:9,
                 from matter.h:5,
                 from altrep.cpp:3:
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = char; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = char; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  140 |                         if ( extent > _region->get_size() )
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = short int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = short int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = long int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = long int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = float; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = float; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = double; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = double; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = char; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = char; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  154 |                         if ( extent > _region->get_size() )
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = short int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = short int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long unsigned int; index_t = long int]’
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = long int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = long int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long int; size_t = long unsigned int; index_t = long int]’
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = float; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = float; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long unsigned int; index_t = long int]’
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = double; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = double; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall  -c init.cpp -o init.o
In file included from atoms.h:9,
                 from matterExports.h:5,
                 from init.cpp:4:
resources.h: In member function ‘void SharedMemorySource::resize(size_t)’:
resources.h:189:51: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  189 |                         if ( shared_memory_size() < size )
      |                              ~~~~~~~~~~~~~~~~~~~~~^~~~~~
In file included from matterExports.h:5,
                 from init.cpp:4:
atoms.h: In member function ‘SEXPREC* Atoms::regroup_index(size_t)’:
atoms.h:728:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  728 |                         for ( index_t i = 0; i < ngroups; i++ )
      |                                              ~~^~~~~~~~~
atoms.h:738:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  738 |                         for ( index_t i = 0; i < ngroups; i++ )
      |                                              ~~^~~~~~~~~
In file included from matterExports.h:6,
                 from init.cpp:4:
matter.h: In member function ‘void MatterArray::set_region(index_t, size_t, SEXP)’:
matter.h:178:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  178 |                         if ( size > XLENGTH(value) && stride != 0 ) {
      |                              ~~~~~^~~~~~~~~~~~~~~~
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:153:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |                         size = len - i > size ? size : len - i;
      |                                ~~~~~~~~^~~~~~
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:157:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:165:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:184:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   96 |                         size = len - i > size ? size : len - i;
      |                                ~~~~~~~~^~~~~~
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:187:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:193:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from matterExports.h:4,
                 from init.cpp:4:
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = int; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:572:22:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]’
drle.h:595:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  548 |         while ( i < XLENGTH(indx) && j < nruns )
      |                 ~~^~~~~~~~~~~~~~~
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = double; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:576:25:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]’
drle.h:595:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = int; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:572:22:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]’
drle.h:599:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = double; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:576:25:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]’
drle.h:599:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
In file included from matter.h:6,
                 from matterExports.h:6,
                 from init.cpp:4:
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:153:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  189 |                         for ( index_t j = 0; j < size; j++ )
      |                                              ~~^~~~~~
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:157:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:165:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from drle.h:4,
                 from matterExports.h:4,
                 from init.cpp:4:
matterDefines.h: In instantiation of ‘size_t ArrayInterface::transpose_index(T*, SEXP, bool) [with T = long int; size_t = long unsigned int; SEXP = SEXPREC*]’:
matter.h:116:20:   required from ‘size_t MatterArray::get_elements(SEXP, T*, int) [with T = unsigned char; size_t = long unsigned int; SEXP = SEXPREC*]’
matter.h:209:18:   required from here
matterDefines.h:379:47: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  379 |                         for ( size_t j = 0; j < XLENGTH(indx); j++ )
      |                                             ~~^~~~~~~~~~~~~~~
In file included from matterExports.h:7,
                 from init.cpp:4:
sparse.h: In instantiation of ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’:
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
sparse.h:305:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  305 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:332:59: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |                                         if ( ii < 0 || ii >= size )
      |                                                        ~~~^~~~~~~
sparse.h: In instantiation of ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’:
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
sparse.h:305:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  305 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:332:59: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |                                         if ( ii < 0 || ii >= size )
      |                                                        ~~~^~~~~~~
sparse.h: In instantiation of ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’:
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:417:30:   required from here
sparse.h:305:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  305 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:332:59: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |                                         if ( ii < 0 || ii >= size )
      |                                                        ~~~^~~~~~~
sparse.h: In instantiation of ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’:
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:420:33:   required from here
sparse.h:305:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  305 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:332:59: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |                                         if ( ii < 0 || ii >= size )
      |                                                        ~~~^~~~~~~
In file included from matterExports.h:5,
                 from init.cpp:4:
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  356 |                         if ( pos + size >= extent(atom) )
      |                              ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:481:29:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:489:32:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  381 |                         if ( pos + size >= extent(atom) )
      |                              ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:525:29:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:531:32:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
In file included from matterExports.h:7,
                 from init.cpp:4:
sparse.h: In instantiation of ‘void SparseArray::copy_domain(index_t, size_t, T*) [with T = int; index_t = long int; size_t = long unsigned int]’:
sparse.h:318:22:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
sparse.h:187:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  187 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from init.cpp:4:
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’:
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1687 |                         for ( index_t i = indx[j]; i < ni; i++ )
      |                                                    ~~^~~~
In file included from matterExports.h:7,
                 from init.cpp:4:
sparse.h: In instantiation of ‘void SparseArray::copy_domain(index_t, size_t, T*) [with T = double; index_t = long int; size_t = long unsigned int]’:
sparse.h:318:22:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
sparse.h:187:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  187 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from init.cpp:4:
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’:
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1687 |                         for ( index_t i = indx[j]; i < ni; i++ )
      |                                                    ~~^~~~
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’:
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:417:30:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’:
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:420:33:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from atoms.h:9,
                 from matterExports.h:5,
                 from init.cpp:4:
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = char; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = char; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  140 |                         if ( extent > _region->get_size() )
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = short int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = short int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = long int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = long int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = float; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = float; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = double; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = double; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:477:31:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = char; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = char; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  154 |                         if ( extent > _region->get_size() )
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = short int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = short int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long unsigned int; index_t = long int]’
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = long int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = long int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long int; size_t = long unsigned int; index_t = long int]’
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = float; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = float; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long unsigned int; index_t = long int]’
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = double; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = double; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:522:31:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from signal.h:6,
                 from sparse.h:5,
                 from matterExports.h:7,
                 from init.cpp:4:
search.h: In instantiation of ‘index_t binary_search(T, T*, size_t, size_t, double, int, int, bool, bool) [with T = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1600:19:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
search.h:421:16: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  421 |         if ( j == end )
      |              ~~^~~~~~
search.h: In instantiation of ‘index_t binary_search(T, T*, size_t, size_t, double, int, int, bool, bool) [with T = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1600:19:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
search.h:421:16: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from drle.h:4,
                 from matterExports.h:4,
                 from init.cpp:4:
signal.h: In instantiation of ‘index_t peak_lbound(T*, index_t, size_t) [with T = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1575:23:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1249:43: note: in expansion of macro ‘norm_ind’
 1249 |                         index_t lwindow = norm_ind(cand - 2, n);
      |                                           ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from init.cpp:4:
signal.h: In instantiation of ‘index_t peak_rbound(T*, index_t, size_t) [with T = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1576:23:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
signal.h:1276:39: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1276 |         for ( index_t i = peak + 1; i < n; i++ )
      |                                     ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from init.cpp:4:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1287:43: note: in expansion of macro ‘norm_ind’
 1287 |                         index_t rwindow = norm_ind(cand + 2, n);
      |                                           ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from init.cpp:4:
signal.h: In instantiation of ‘double interp1_linear(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1580:25:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
signal.h:1460:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1460 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol ) {
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_cubic(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1582:24:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
signal.h:1491:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1491 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1495:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1495 |                 if ( i + 2 < n && udiff(x[i + 2], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1509:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_linear(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1580:25:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
signal.h:1460:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1460 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol ) {
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_cubic(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1582:24:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
signal.h:1491:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1491 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1495:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1495 |                 if ( i + 2 < n && udiff(x[i + 2], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1509:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from init.cpp:4:
signal.h: In instantiation of ‘index_t peak_lbound(T*, index_t, size_t) [with T = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1575:23:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:417:30:   required from here
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1249:43: note: in expansion of macro ‘norm_ind’
 1249 |                         index_t lwindow = norm_ind(cand - 2, n);
      |                                           ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from init.cpp:4:
signal.h: In instantiation of ‘index_t peak_rbound(T*, index_t, size_t) [with T = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1576:23:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:417:30:   required from here
signal.h:1276:39: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1276 |         for ( index_t i = peak + 1; i < n; i++ )
      |                                     ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from init.cpp:4:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1287:43: note: in expansion of macro ‘norm_ind’
 1287 |                         index_t rwindow = norm_ind(cand + 2, n);
      |                                           ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from init.cpp:4:
signal.h: In instantiation of ‘double interp1_linear(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1580:25:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:417:30:   required from here
signal.h:1460:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1460 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol ) {
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_cubic(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1582:24:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:417:30:   required from here
signal.h:1491:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1491 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1495:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1495 |                 if ( i + 2 < n && udiff(x[i + 2], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1509:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_linear(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = double; Ty = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1580:25:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:420:33:   required from here
signal.h:1460:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1460 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol ) {
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_cubic(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = double; Ty = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1582:24:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:420:33:   required from here
signal.h:1491:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1491 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1495:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1495 |                 if ( i + 2 < n && udiff(x[i + 2], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1509:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘index_t wupper(T, T*, index_t, size_t, double, int) [with T = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1436:24:   required from ‘double interp1_stat(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1572:23:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
signal.h:1425:19: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1425 |         while ( i < n - 1 && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                 ~~^~~~~~~
signal.h: In instantiation of ‘index_t wupper(T, T*, index_t, size_t, double, int) [with T = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1436:24:   required from ‘double interp1_stat(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1572:23:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
signal.h:1425:19: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from init.cpp:5:
altrep.h: At global scope:
altrep.h:17:25: warning: ‘matter_altstring’ defined but not used [-Wunused-variable]
   17 | static R_altrep_class_t matter_altstring;
      |                         ^~~~~~~~~~~~~~~~
altrep.h:16:25: warning: ‘matter_altreal’ defined but not used [-Wunused-variable]
   16 | static R_altrep_class_t matter_altreal;
      |                         ^~~~~~~~~~~~~~
altrep.h:15:25: warning: ‘matter_altinteger’ defined but not used [-Wunused-variable]
   15 | static R_altrep_class_t matter_altinteger;
      |                         ^~~~~~~~~~~~~~~~~
altrep.h:14:25: warning: ‘matter_altlogical’ defined but not used [-Wunused-variable]
   14 | static R_altrep_class_t matter_altlogical;
      |                         ^~~~~~~~~~~~~~~~~
altrep.h:13:25: warning: ‘matter_altraw’ defined but not used [-Wunused-variable]
   13 | static R_altrep_class_t matter_altraw;
      |                         ^~~~~~~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.20-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall  -c matterExports.cpp -o matterExports.o
In file included from atoms.h:9,
                 from matterExports.h:5,
                 from matterExports.cpp:2:
resources.h: In member function ‘void SharedMemorySource::resize(size_t)’:
resources.h:189:51: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  189 |                         if ( shared_memory_size() < size )
      |                              ~~~~~~~~~~~~~~~~~~~~~^~~~~~
In file included from matterExports.h:5,
                 from matterExports.cpp:2:
atoms.h: In member function ‘SEXPREC* Atoms::regroup_index(size_t)’:
atoms.h:728:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  728 |                         for ( index_t i = 0; i < ngroups; i++ )
      |                                              ~~^~~~~~~~~
atoms.h:738:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  738 |                         for ( index_t i = 0; i < ngroups; i++ )
      |                                              ~~^~~~~~~~~
In file included from matterExports.h:6,
                 from matterExports.cpp:2:
matter.h: In member function ‘void MatterArray::set_region(index_t, size_t, SEXP)’:
matter.h:178:35: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  178 |                         if ( size > XLENGTH(value) && stride != 0 ) {
      |                              ~~~~~^~~~~~~~~~~~~~~~
matterExports.cpp: In function ‘SEXPREC* kdSearch(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’:
matterExports.cpp:219:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  219 |         for ( index_t i = 0; i < nx; i++ )
      |                              ~~^~~~
matterExports.cpp:226:56: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  226 |                                 for ( index_t j = 0; j < k; j++ )
      |                                                      ~~^~~
matterExports.cpp:236:56: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  236 |                                 for ( index_t j = 0; j < k; j++ )
      |                                                      ~~^~~
matterExports.cpp:247:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  247 |                 for ( index_t j = 0; j < nnb; j++ )
      |                                      ~~^~~~~
matterExports.cpp: In function ‘SEXPREC* rowDistAt(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’:
matterExports.cpp:369:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  369 |         for ( index_t i = 0; i < nout; i++ )
      |                              ~~^~~~~~
matterExports.cpp: In function ‘SEXPREC* colDistAt(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’:
matterExports.cpp:413:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  413 |         for ( index_t i = 0; i < nout; i++ )
      |                              ~~^~~~~~
matterExports.cpp: In function ‘SEXPREC* warpCOW(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’:
matterExports.cpp:881:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  881 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
In file included from matterExports.h:6,
                 from matterExports.cpp:2:
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:153:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |                         size = len - i > size ? size : len - i;
      |                                ~~~~~~~~^~~~~~
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:157:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:165:16:   required from here
matter.h:73:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:184:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   96 |                         size = len - i > size ? size : len - i;
      |                                ~~~~~~~~^~~~~~
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:187:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
matter.h: In instantiation of ‘size_t MatterArray::set_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:193:16:   required from here
matter.h:96:40: warning: comparison of integer expressions of different signedness: ‘R_xlen_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from signal.h:6,
                 from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
search.h: In instantiation of ‘index_t kd_tree_build(T*, size_t, size_t, int*, int*) [with T = int; index_t = long int; size_t = long unsigned int]’:
matterExports.cpp:192:24:   required from here
search.h:503:22: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  503 |         if ( mid + 1 < n )
      |              ~~~~~~~~^~~
search.h:510:46: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  510 |                 for ( index_t i = mid + 1; i < n; i++ )
      |                                            ~~^~~
search.h: In instantiation of ‘index_t kd_tree_build(T*, size_t, size_t, int*, int*) [with T = double; index_t = long int; size_t = long unsigned int]’:
matterExports.cpp:196:24:   required from here
search.h:503:22: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  503 |         if ( mid + 1 < n )
      |              ~~~~~~~~^~~
search.h:510:46: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  510 |                 for ( index_t i = mid + 1; i < n; i++ )
      |                                            ~~^~~
search.h: In instantiation of ‘index_t kd_tree_search(int*, T*, T*, size_t, size_t, int*, int*, size_t, double*, int, bool) [with T = int; index_t = long int; size_t = long unsigned int]’:
matterExports.cpp:228:25:   required from here
search.h:601:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  601 |                         for ( j = 0; j < k; j++ )
      |                                      ~~^~~
search.h: In instantiation of ‘index_t kd_tree_search(int*, T*, T*, size_t, size_t, int*, int*, size_t, double*, int, bool) [with T = double; index_t = long int; size_t = long unsigned int]’:
matterExports.cpp:238:25:   required from here
search.h:601:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
search.h: In instantiation of ‘void do_knn_self_search(int*, T*, size_t, size_t, int*, int*, int, int, double, bool) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:291:22:   required from here
search.h:835:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  835 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
search.h: In instantiation of ‘void do_knn_self_search(int*, T*, size_t, size_t, int*, int*, int, int, double, bool) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:296:22:   required from here
search.h:835:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from search.h:5,
                 from signal.h:6,
                 from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
dist.h: In instantiation of ‘void row_dist(T*, T*, size_t, size_t, size_t, double*, int, double, double*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:321:12:   required from here
dist.h:63:34: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   63 |         for ( index_t ix = 0; ix < nx; ix++ )
      |                               ~~~^~~~
dist.h:65:42: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   65 |                 for ( index_t iy = 0; iy < ny; iy++ )
      |                                       ~~~^~~~
dist.h: In instantiation of ‘void row_dist(T*, T*, size_t, size_t, size_t, double*, int, double, double*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:325:12:   required from here
dist.h:63:34: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   63 |         for ( index_t ix = 0; ix < nx; ix++ )
      |                               ~~~^~~~
dist.h:65:42: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   65 |                 for ( index_t iy = 0; iy < ny; iy++ )
      |                                       ~~~^~~~
dist.h: In instantiation of ‘void col_dist(T*, T*, size_t, size_t, size_t, double*, int, double, double*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:346:12:   required from here
dist.h:79:34: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   79 |         for ( index_t ix = 0; ix < nx; ix++ )
      |                               ~~~^~~~
dist.h:81:42: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   81 |                 for ( index_t iy = 0; iy < ny; iy++ )
      |                                       ~~~^~~~
dist.h: In instantiation of ‘void col_dist(T*, T*, size_t, size_t, size_t, double*, int, double, double*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:350:12:   required from here
dist.h:79:34: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   79 |         for ( index_t ix = 0; ix < nx; ix++ )
      |                               ~~~^~~~
dist.h:81:42: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   81 |                 for ( index_t iy = 0; iy < ny; iy++ )
      |                                       ~~~^~~~
dist.h: In instantiation of ‘void row_dist_at(T*, T*, int*, int*, size_t, size_t, size_t, size_t, double*, int, double, double*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:387:16:   required from here
dist.h:96:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   96 |         for ( index_t i = 0; i < ni; i++ )
      |                              ~~^~~~
dist.h:102:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  102 |                 if ( indx[i] < 0 || indx[i] >= nx )
      |                                     ~~~~~~~~^~~~~
dist.h:104:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  104 |                 if ( indy[i] < 0 || indy[i] >= ny )
      |                                     ~~~~~~~~^~~~~
dist.h: In instantiation of ‘void row_dist_at(T*, T*, int*, int*, size_t, size_t, size_t, size_t, double*, int, double, double*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:391:16:   required from here
dist.h:96:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   96 |         for ( index_t i = 0; i < ni; i++ )
      |                              ~~^~~~
dist.h:102:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  102 |                 if ( indx[i] < 0 || indx[i] >= nx )
      |                                     ~~~~~~~~^~~~~
dist.h:104:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  104 |                 if ( indy[i] < 0 || indy[i] >= ny )
      |                                     ~~~~~~~~^~~~~
dist.h: In instantiation of ‘void col_dist_at(T*, T*, int*, int*, size_t, size_t, size_t, size_t, double*, int, double, double*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:431:16:   required from here
dist.h:117:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  117 |         for ( index_t i = 0; i < ni; i++ )
      |                              ~~^~~~
dist.h:123:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  123 |                 if ( indx[i] < 0 || indx[i] >= nx )
      |                                     ~~~~~~~~^~~~~
dist.h:125:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  125 |                 if ( indy[i] < 0 || indy[i] >= ny )
      |                                     ~~~~~~~~^~~~~
dist.h: In instantiation of ‘void col_dist_at(T*, T*, int*, int*, size_t, size_t, size_t, size_t, double*, int, double, double*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:435:16:   required from here
dist.h:117:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  117 |         for ( index_t i = 0; i < ni; i++ )
      |                              ~~^~~~
dist.h:123:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  123 |                 if ( indx[i] < 0 || indx[i] >= nx )
      |                                     ~~~~~~~~^~~~~
dist.h:125:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  125 |                 if ( indy[i] < 0 || indy[i] >= ny )
      |                                     ~~~~~~~~^~~~~
dist.h: In instantiation of ‘index_t do_in_poly(int*, T*, size_t, T*, size_t) [with T = int; index_t = long int; size_t = long unsigned int]’:
matterExports.cpp:456:14:   required from here
dist.h:176:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  176 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
dist.h: In instantiation of ‘index_t do_in_poly(int*, T*, size_t, T*, size_t) [with T = double; index_t = long int; size_t = long unsigned int]’:
matterExports.cpp:460:14:   required from here
dist.h:176:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void mean_filter(T*, size_t, int, double*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:716:15:   required from here
signal.h:294:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  294 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:296:24: note: in expansion of macro ‘norm_ind’
  296 |                 prev = norm_ind(i - r - 1, n);
      |                        ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:297:22: note: in expansion of macro ‘norm_ind’
  297 |                 lo = norm_ind(i - r, n);
      |                      ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:298:22: note: in expansion of macro ‘norm_ind’
  298 |                 hi = norm_ind(i + r, n);
      |                      ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:313:38: note: in expansion of macro ‘norm_ind’
  313 |                                 ij = norm_ind(i + j, n);
      |                                      ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h:329:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  329 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal.h: In instantiation of ‘void mean_filter(T*, size_t, int, double*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:720:15:   required from here
signal.h:294:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  294 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:296:24: note: in expansion of macro ‘norm_ind’
  296 |                 prev = norm_ind(i - r - 1, n);
      |                        ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:297:22: note: in expansion of macro ‘norm_ind’
  297 |                 lo = norm_ind(i - r, n);
      |                      ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:298:22: note: in expansion of macro ‘norm_ind’
  298 |                 hi = norm_ind(i + r, n);
      |                      ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:313:38: note: in expansion of macro ‘norm_ind’
  313 |                                 ij = norm_ind(i + j, n);
      |                                      ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h:329:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  329 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal.h: In instantiation of ‘void linear_filter(T*, size_t, double*, int, double*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:736:17:   required from here
signal.h:342:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  342 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:353:30: note: in expansion of macro ‘norm_ind’
  353 |                         ij = norm_ind(i + j, n);
      |                              ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void linear_filter(T*, size_t, double*, int, double*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:740:17:   required from here
signal.h:342:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  342 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:353:30: note: in expansion of macro ‘norm_ind’
  353 |                         ij = norm_ind(i + j, n);
      |                              ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void bilateral_filter(T*, size_t, int, double, double, double, double*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:757:20:   required from here
signal.h:381:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  381 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:396:38: note: in expansion of macro ‘norm_ind’
  396 |                                 ij = norm_ind(i + j, n);
      |                                      ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:417:30: note: in expansion of macro ‘norm_ind’
  417 |                         ij = norm_ind(i + j, n);
      |                              ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void bilateral_filter(T*, size_t, int, double, double, double, double*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:762:20:   required from here
signal.h:381:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  381 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:396:38: note: in expansion of macro ‘norm_ind’
  396 |                                 ij = norm_ind(i + j, n);
      |                                      ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:417:30: note: in expansion of macro ‘norm_ind’
  417 |                         ij = norm_ind(i + j, n);
      |                              ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void diffusion_filter(T*, size_t, int, double, double, int, double*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:780:20:   required from here
signal.h:440:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  440 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal.h:446:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  446 |                 for ( index_t i = 0; i < n; i++ )
      |                                      ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:454:29: note: in expansion of macro ‘norm_ind’
  454 |                         L = norm_ind(i - 1, n);
      |                             ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:455:29: note: in expansion of macro ‘norm_ind’
  455 |                         R = norm_ind(i + 1, n);
      |                             ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void diffusion_filter(T*, size_t, int, double, double, int, double*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:785:20:   required from here
signal.h:440:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  440 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal.h:446:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  446 |                 for ( index_t i = 0; i < n; i++ )
      |                                      ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:454:29: note: in expansion of macro ‘norm_ind’
  454 |                         L = norm_ind(i - 1, n);
      |                             ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:455:29: note: in expansion of macro ‘norm_ind’
  455 |                         R = norm_ind(i + 1, n);
      |                             ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void bin_vector(T*, int, int*, int*, int, double*, int, double) [with T = int]’:
matterExports.cpp:928:14:   required from here
signal.h:881:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  881 |         for ( size_t i = 0; i < nbin; i++ )
      |                             ~~^~~~~~
signal.h: In instantiation of ‘void bin_vector(T*, int, int*, int*, int, double*, int, double) [with T = double]’:
matterExports.cpp:932:14:   required from here
signal.h:881:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
signal.h: In instantiation of ‘size_t convex_hull(T*, T*, size_t, int*, bool) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:1021:19:   required from here
signal.h:1141:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1141 |                 for ( index_t i = 0; i < n; i++ )
      |                                      ~~^~~
signal.h: In instantiation of ‘size_t convex_hull(T*, T*, size_t, int*, bool) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:1025:19:   required from here
signal.h:1141:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void smooth_snip(T*, size_t, T*, int, bool) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:1042:15:   required from here
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:1163:13: note: in expansion of macro ‘min2’
 1163 |         m = min2(m, n);
      |             ^~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h:1180:39: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1180 |                 for ( size_t p = 1; p <= m; p++ )
      |                                     ~~^~~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void smooth_snip(T*, size_t, T*, int, bool) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:1046:15:   required from here
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:1163:13: note: in expansion of macro ‘min2’
 1163 |         m = min2(m, n);
      |             ^~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h:1180:39: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
 1180 |                 for ( size_t p = 1; p <= m; p++ )
      |                                     ~~^~~~
signal.h: In instantiation of ‘size_t local_maxima(T*, size_t, int*, int) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:1062:16:   required from here
signal.h:1202:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1202 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal.h:1205:33: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1205 |                 if ( i < r || i > n - r )
      |                               ~~^~~~~~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1207:21: note: in expansion of macro ‘norm_ind’
 1207 |                 a = norm_ind(i - r, n);
      |                     ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1208:21: note: in expansion of macro ‘norm_ind’
 1208 |                 b = norm_ind(i + r, n);
      |                     ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘size_t local_maxima(T*, size_t, int*, int) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:1066:16:   required from here
signal.h:1202:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1202 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal.h:1205:33: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1205 |                 if ( i < r || i > n - r )
      |                               ~~^~~~~~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1207:21: note: in expansion of macro ‘norm_ind’
 1207 |                 a = norm_ind(i - r, n);
      |                     ^~~~~~~~
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1208:21: note: in expansion of macro ‘norm_ind’
 1208 |                 b = norm_ind(i + r, n);
      |                     ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘void peak_boundaries(T*, size_t, int*, size_t, int*, int*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:1084:19:   required from here
signal.h:1313:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1313 |                 if ( peaks[i] < 0 || peaks[i] >= n )
      |                                      ~~~~~~~~~^~~~
signal.h: In instantiation of ‘void peak_boundaries(T*, size_t, int*, size_t, int*, int*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:1089:19:   required from here
signal.h:1313:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
signal.h: In instantiation of ‘void peak_bases(T*, size_t, int*, size_t, int*, int*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:1110:14:   required from here
signal.h:1327:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1327 |                 if ( peaks[i] < 0 || peaks[i] >= n )
      |                                      ~~~~~~~~~^~~~
signal.h:1340:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1340 |                 for ( int j = peaks[i] + 1; j < n; j++ )
      |                                             ~~^~~
signal.h: In instantiation of ‘void peak_bases(T*, size_t, int*, size_t, int*, int*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:1115:14:   required from here
signal.h:1327:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1327 |                 if ( peaks[i] < 0 || peaks[i] >= n )
      |                                      ~~~~~~~~~^~~~
signal.h:1340:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1340 |                 for ( int j = peaks[i] + 1; j < n; j++ )
      |                                             ~~^~~
signal.h: In instantiation of ‘void peak_widths(Tx*, Tt*, size_t, int*, size_t, int*, int*, double*, double*, double*) [with Tx = int; Tt = double; size_t = long unsigned int]’:
matterExports.cpp:1139:15:   required from here
signal.h:1359:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1359 |                 if ( peaks[i] < 0 || peaks[i] >= n )
      |                                      ~~~~~~~~~^~~~
signal.h:1361:58: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1361 |                 if ( left_limit[i] < 0 || right_limit[i] >= n )
      |                                           ~~~~~~~~~~~~~~~^~~~
signal.h:1376:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1376 |                 for ( int j = peaks[i] + 1; j < n && j <= right_limit[i]; j++ )
      |                                             ~~^~~
signal.h: In instantiation of ‘void peak_widths(Tx*, Tt*, size_t, int*, size_t, int*, int*, double*, double*, double*) [with Tx = double; Tt = double; size_t = long unsigned int]’:
matterExports.cpp:1145:15:   required from here
signal.h:1359:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1359 |                 if ( peaks[i] < 0 || peaks[i] >= n )
      |                                      ~~~~~~~~~^~~~
signal.h:1361:58: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1361 |                 if ( left_limit[i] < 0 || right_limit[i] >= n )
      |                                           ~~~~~~~~~~~~~~~^~~~
signal.h:1376:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1376 |                 for ( int j = peaks[i] + 1; j < n && j <= right_limit[i]; j++ )
      |                                             ~~^~~
signal.h: In instantiation of ‘void peak_areas(Tx*, Tt*, size_t, int*, size_t, int*, int*, double*) [with Tx = int; Tt = double; size_t = long unsigned int]’:
matterExports.cpp:1168:14:   required from here
signal.h:1397:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1397 |                 if ( peaks[i] < 0 || peaks[i] >= n )
      |                                      ~~~~~~~~~^~~~
signal.h:1401:58: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1401 |                 if ( left_limit[i] < 0 || right_limit[i] >= n )
      |                                           ~~~~~~~~~~~~~~~^~~~
signal.h: In instantiation of ‘void peak_areas(Tx*, Tt*, size_t, int*, size_t, int*, int*, double*) [with Tx = double; Tt = double; size_t = long unsigned int]’:
matterExports.cpp:1174:14:   required from here
signal.h:1397:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1397 |                 if ( peaks[i] < 0 || peaks[i] >= n )
      |                                      ~~~~~~~~~^~~~
signal.h:1401:58: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1401 |                 if ( left_limit[i] < 0 || right_limit[i] >= n )
      |                                           ~~~~~~~~~~~~~~~^~~~
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = double; size_t = long unsigned int]’:
matterExports.cpp:1199:25:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1687 |                         for ( index_t i = indx[j]; i < ni; i++ )
      |                                                    ~~^~~~
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = double; size_t = long unsigned int]’:
matterExports.cpp:1205:28:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’:
matterExports.cpp:1217:28:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’:
matterExports.cpp:1223:31:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from matterExports.h:12,
                 from matterExports.cpp:2:
signal2.h: In instantiation of ‘void diffusion_filter2(T*, int, int, int, double, double, int, double*) [with T = int]’:
matterExports.cpp:1337:22:   required from here
signal2.h:377:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  377 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal2.h: In instantiation of ‘void diffusion_filter2(T*, int, int, int, double, double, int, double*) [with T = double]’:
matterExports.cpp:1342:22:   required from here
signal2.h:377:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
signal2.h: In instantiation of ‘size_t local_maxima_knn(T*, size_t, size_t, int*, int*) [with T = int; size_t = long unsigned int]’:
matterExports.cpp:1441:20:   required from here
signal2.h:720:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  720 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal2.h:723:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  723 |                 for ( index_t j = 0; j < k; j++ )
      |                                      ~~^~~
signal2.h: In instantiation of ‘size_t local_maxima_knn(T*, size_t, size_t, int*, int*) [with T = double; size_t = long unsigned int]’:
matterExports.cpp:1445:20:   required from here
signal2.h:720:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  720 |         for ( index_t i = 0; i < n; i++ )
      |                              ~~^~~
signal2.h:723:40: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  723 |                 for ( index_t j = 0; j < k; j++ )
      |                                      ~~^~~
signal2.h: In instantiation of ‘size_t do_approx2(Tout*, Txy*, Txy*, size_t, Txy*, Tz*, size_t, double*, int, Tout, int, int) [with Txy = int; Tz = int; Tout = double; size_t = long unsigned int]’:
matterExports.cpp:1470:25:   required from here
signal2.h:870:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  870 |         for ( index_t i = 0; i < ni; i++ )
      |                              ~~^~~~
signal2.h: In instantiation of ‘size_t do_approx2(Tout*, Txy*, Txy*, size_t, Txy*, Tz*, size_t, double*, int, Tout, int, int) [with Txy = double; Tz = int; Tout = double; size_t = long unsigned int]’:
matterExports.cpp:1477:28:   required from here
signal2.h:870:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
signal2.h: In instantiation of ‘size_t do_approx2(Tout*, Txy*, Txy*, size_t, Txy*, Tz*, size_t, double*, int, Tout, int, int) [with Txy = int; Tz = double; Tout = double; size_t = long unsigned int]’:
matterExports.cpp:1490:28:   required from here
signal2.h:870:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
signal2.h: In instantiation of ‘size_t do_approx2(Tout*, Txy*, Txy*, size_t, Txy*, Tz*, size_t, double*, int, Tout, int, int) [with Txy = double; Tz = double; Tout = double; size_t = long unsigned int]’:
matterExports.cpp:1497:31:   required from here
signal2.h:870:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from matterExports.h:4,
                 from matterExports.cpp:2:
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = int; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:572:22:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]’
drle.h:595:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  548 |         while ( i < XLENGTH(indx) && j < nruns )
      |                 ~~^~~~~~~~~~~~~~~
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = int; Tlen = double; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:576:25:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = int; SEXP = SEXPREC*]’
drle.h:595:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = int; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:572:22:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]’
drle.h:599:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
drle.h: In instantiation of ‘size_t recode_drle(CompressedVector<T>, SEXP, Tval*, Tval*, Tlen*, size_t) [with Tval = double; Tlen = double; size_t = long unsigned int; SEXP = SEXPREC*]’:
drle.h:576:25:   required from ‘SEXPREC* recode_drle(CompressedVector<T>, SEXP) [with T = double; SEXP = SEXPREC*]’
drle.h:599:22:   required from here
drle.h:548:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
In file included from matter.h:6,
                 from matterExports.h:6,
                 from matterExports.cpp:2:
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matter.h:153:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  189 |                         for ( index_t j = 0; j < size; j++ )
      |                                              ~~^~~~~~
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matter.h:157:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
ops.h: In instantiation of ‘size_t DeferredOps::apply(T*, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’:
matter.h:83:20:   required from ‘size_t MatterArray::get_region(index_t, size_t, T*, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matter.h:165:16:   required from here
ops.h:189:48: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h: In instantiation of ‘size_t ArrayInterface::transpose_index(T*, SEXP, bool) [with T = long int; size_t = long unsigned int; SEXP = SEXPREC*]’:
matter.h:116:20:   required from ‘size_t MatterArray::get_elements(SEXP, T*, int) [with T = unsigned char; size_t = long unsigned int; SEXP = SEXPREC*]’
matter.h:209:18:   required from here
matterDefines.h:379:47: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare]
  379 |                         for ( size_t j = 0; j < XLENGTH(indx); j++ )
      |                                             ~~^~~~~~~~~~~~~~~
In file included from matterExports.h:7,
                 from matterExports.cpp:2:
sparse.h: In instantiation of ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’:
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
sparse.h:305:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  305 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:332:59: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |                                         if ( ii < 0 || ii >= size )
      |                                                        ~~~^~~~~~~
sparse.h: In instantiation of ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’:
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
sparse.h:305:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  305 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:332:59: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |                                         if ( ii < 0 || ii >= size )
      |                                                        ~~~^~~~~~~
sparse.h: In instantiation of ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’:
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:417:30:   required from here
sparse.h:305:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  305 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:332:59: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |                                         if ( ii < 0 || ii >= size )
      |                                                        ~~~^~~~~~~
sparse.h: In instantiation of ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’:
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = double; size_t = long unsigned int; index_t = long int]’
sparse.h:420:33:   required from here
sparse.h:305:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  305 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
sparse.h:332:59: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |                                         if ( ii < 0 || ii >= size )
      |                                                        ~~~^~~~~~~
In file included from signal.h:6,
                 from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
search.h: In instantiation of ‘index_t binary_search(T, T*, size_t, size_t, double, int, int, bool, bool) [with T = int; index_t = long int; size_t = long unsigned int]’:
search.h:449:26:   required from ‘index_t do_binary_search(int*, T*, size_t, T*, size_t, size_t, double, int, int, bool, bool) [with T = int; index_t = long int; size_t = long unsigned int]’
matterExports.cpp:161:20:   required from here
search.h:421:16: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  421 |         if ( j == end )
      |              ~~^~~~~~
search.h: In instantiation of ‘index_t binary_search(T, T*, size_t, size_t, double, int, int, bool, bool) [with T = double; index_t = long int; size_t = long unsigned int]’:
search.h:449:26:   required from ‘index_t do_binary_search(int*, T*, size_t, T*, size_t, size_t, double, int, int, bool, bool) [with T = double; index_t = long int; size_t = long unsigned int]’
matterExports.cpp:166:20:   required from here
search.h:421:16: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
search.h: In instantiation of ‘index_t binary_search(T, T*, size_t, size_t, double, int, int, bool, bool) [with T = SEXPREC*; index_t = long int; size_t = long unsigned int]’:
search.h:449:26:   required from ‘index_t do_binary_search(int*, T*, size_t, T*, size_t, size_t, double, int, int, bool, bool) [with T = SEXPREC*; index_t = long int; size_t = long unsigned int]’
matterExports.cpp:171:20:   required from here
search.h:421:16: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from search.h:5,
                 from signal.h:6,
                 from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
dist.h: In instantiation of ‘double do_dist(T*, T*, size_t, int, int, int, double, double*) [with T = int; size_t = long unsigned int]’:
dist.h:69:34:   required from ‘void row_dist(T*, T*, size_t, size_t, size_t, double*, int, double, double*) [with T = int; size_t = long unsigned int]’
matterExports.cpp:321:12:   required from here
dist.h:21:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   21 |         for ( index_t i = 0; i < k; i++ )
      |                              ~~^~~
dist.h: In instantiation of ‘double do_dist(T*, T*, size_t, int, int, int, double, double*) [with T = double; size_t = long unsigned int]’:
dist.h:69:34:   required from ‘void row_dist(T*, T*, size_t, size_t, size_t, double*, int, double, double*) [with T = double; size_t = long unsigned int]’
matterExports.cpp:325:12:   required from here
dist.h:21:32: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
dist.h: In instantiation of ‘bool in_poly(T, T, T*, T*, size_t) [with T = int; size_t = long unsigned int]’:
dist.h:178:19:   required from ‘index_t do_in_poly(int*, T*, size_t, T*, size_t) [with T = int; index_t = long int; size_t = long unsigned int]’
matterExports.cpp:456:14:   required from here
dist.h:144:39: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  144 |         for ( i = 0, j = nvert - 1; i < nvert; j = i++)
      |                                     ~~^~~~~~~
dist.h: In instantiation of ‘bool in_poly(T, T, T*, T*, size_t) [with T = double; size_t = long unsigned int]’:
dist.h:178:19:   required from ‘index_t do_in_poly(int*, T*, size_t, T*, size_t) [with T = double; index_t = long int; size_t = long unsigned int]’
matterExports.cpp:460:14:   required from here
dist.h:144:39: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from matterExports.h:5,
                 from matterExports.cpp:2:
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  356 |                         if ( pos + size >= extent(atom) )
      |                              ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:504:20:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:508:23:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  381 |                         if ( pos + size >= extent(atom) )
      |                              ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = int; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = int; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:532:20:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = double; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = double; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:535:23:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘index_t peak_lbound(T*, index_t, size_t) [with T = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1315:31:   required from ‘void peak_boundaries(T*, size_t, int*, size_t, int*, int*) [with T = int; size_t = long unsigned int]’
matterExports.cpp:1084:19:   required from here
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1249:43: note: in expansion of macro ‘norm_ind’
 1249 |                         index_t lwindow = norm_ind(cand - 2, n);
      |                                           ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘index_t peak_rbound(T*, index_t, size_t) [with T = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1316:32:   required from ‘void peak_boundaries(T*, size_t, int*, size_t, int*, int*) [with T = int; size_t = long unsigned int]’
matterExports.cpp:1084:19:   required from here
signal.h:1276:39: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1276 |         for ( index_t i = peak + 1; i < n; i++ )
      |                                     ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1287:43: note: in expansion of macro ‘norm_ind’
 1287 |                         index_t rwindow = norm_ind(cand + 2, n);
      |                                           ^~~~~~~~
signal.h: In instantiation of ‘index_t peak_lbound(T*, index_t, size_t) [with T = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1315:31:   required from ‘void peak_boundaries(T*, size_t, int*, size_t, int*, int*) [with T = double; size_t = long unsigned int]’
matterExports.cpp:1089:19:   required from here
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1249:43: note: in expansion of macro ‘norm_ind’
 1249 |                         index_t lwindow = norm_ind(cand - 2, n);
      |                                           ^~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘index_t peak_rbound(T*, index_t, size_t) [with T = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1316:32:   required from ‘void peak_boundaries(T*, size_t, int*, size_t, int*, int*) [with T = double; size_t = long unsigned int]’
matterExports.cpp:1089:19:   required from here
signal.h:1276:39: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1276 |         for ( index_t i = peak + 1; i < n; i++ )
      |                                     ~~^~~
In file included from drle.h:4,
                 from matterExports.h:4,
                 from matterExports.cpp:2:
matterDefines.h:12:25: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 | #define min2(x, y) ((x) < (y) ? (x) : (y))
      |                     ~~~~^~~~~
signal.h:42:25: note: in expansion of macro ‘min2’
   42 | #define norm_ind(i, n) (min2(max2((i), 0), (n - 1)))
      |                         ^~~~
signal.h:1287:43: note: in expansion of macro ‘norm_ind’
 1287 |                         index_t rwindow = norm_ind(cand + 2, n);
      |                                           ^~~~~~~~
In file included from matterExports.h:5,
                 from matterExports.cpp:2:
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  356 |                         if ( pos + size >= extent(atom) )
      |                              ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = char; size_t = long unsigned int; index_t = long int]’
atoms.h:467:20:   required from ‘size_t Atoms::get_region(T*, index_t, size_t, int, int) [with T = char; size_t = long unsigned int; index_t = long int]’
matter.h:493:30:   required from here
atoms.h:356:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = char; size_t = long unsigned int; index_t = long int]’:
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  381 |                         if ( pos + size >= extent(atom) )
      |                              ~~~~~~~~~~~^~~~~~~~~~~~~~~
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’:
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short int; size_t = long unsigned int; index_t = long int]’:
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = int; size_t = long unsigned int; index_t = long int]’:
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long int; size_t = long unsigned int; index_t = long int]’:
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’:
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = float; size_t = long unsigned int; index_t = long int]’:
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
atoms.h: In instantiation of ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = const char; Tout = double; size_t = long unsigned int; index_t = long int]’:
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
atoms.h:489:20:   required from ‘size_t Atoms::set_region(T*, index_t, size_t, int, int) [with T = const char; size_t = long unsigned int; index_t = long int]’
matter.h:538:36:   required from here
atoms.h:381:41: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
In file included from matterExports.h:7,
                 from matterExports.cpp:2:
sparse.h: In instantiation of ‘void SparseArray::copy_domain(index_t, size_t, T*) [with T = int; index_t = long int; size_t = long unsigned int]’:
sparse.h:318:22:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
sparse.h:187:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  187 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = int; size_t = long unsigned int]’:
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = int; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:404:27:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1687 |                         for ( index_t i = indx[j]; i < ni; i++ )
      |                                                    ~~^~~~
In file included from matterExports.h:7,
                 from matterExports.cpp:2:
sparse.h: In instantiation of ‘void SparseArray::copy_domain(index_t, size_t, T*) [with T = double; index_t = long int; size_t = long unsigned int]’:
sparse.h:318:22:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
sparse.h:187:48: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘index_t’ {aka ‘long int’} [-Wsign-compare]
  187 |                         if ( i < 0 || i + size > sparse_extent() )
      |                                       ~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = int; size_t = long unsigned int]’:
sparse.h:319:32:   required from ‘size_t SparseArray::get_compressed_region(index_t, index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:373:43:   required from ‘size_t SparseArray::get_region(index_t, size_t, Tval*, int) [with Tind = double; Tval = int; size_t = long unsigned int; index_t = long int]’
sparse.h:407:30:   required from here
signal.h:1687:54: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1687 |                         for ( index_t i = indx[j]; i < ni; i++ )
      |                                                    ~~^~~~
In file included from atoms.h:9,
                 from matterExports.h:5,
                 from matterExports.cpp:2:
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = char; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = char; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:402:30:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  140 |                         if ( extent > _region->get_size() )
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:404:39:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = short int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = short int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:406:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = short unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:408:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:410:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:412:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = long int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = long int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:414:33:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = long unsigned int; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:416:34:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = float; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = float; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = float; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:418:31:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::read(void*, size_t) [with T = double; size_t = long unsigned int]’:
atoms.h:150:52:   required from ‘bool DataSources::read(void*, size_t) [with T = double; size_t = long unsigned int]’
atoms.h:360:58:   required from ‘size_t Atoms::read_atom(Tout*, int, index_t, size_t, int) [with Tin = double; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:420:32:   required from ‘size_t Atoms::get_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:500:22:   required from here
resources.h:140:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = char; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = char; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = char; size_t = long unsigned int; index_t = long int]’
atoms.h:431:31:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  154 |                         if ( extent > _region->get_size() )
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~~~
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = unsigned char; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned char; size_t = long unsigned int; index_t = long int]’
atoms.h:433:40:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = short int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = short int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short int; size_t = long unsigned int; index_t = long int]’
atoms.h:435:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = short unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = short unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:437:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = int; size_t = long unsigned int; index_t = long int]’
atoms.h:439:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:441:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = long int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = long int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long int; size_t = long unsigned int; index_t = long int]’
atoms.h:443:34:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = long unsigned int; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = long unsigned int; size_t = long unsigned int; index_t = long int]’
atoms.h:445:35:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = float; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = float; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = float; size_t = long unsigned int; index_t = long int]’
atoms.h:447:32:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
resources.h: In instantiation of ‘void SharedMemorySource::write(void*, size_t) [with T = double; size_t = long unsigned int]’:
atoms.h:170:53:   required from ‘bool DataSources::write(void*, size_t) [with T = double; size_t = long unsigned int]’
atoms.h:387:60:   required from ‘size_t Atoms::write_atom(Tin*, int, index_t, size_t, int) [with Tin = unsigned char; Tout = double; size_t = long unsigned int; index_t = long int]’
atoms.h:449:33:   required from ‘size_t Atoms::set_atom(T*, int, index_t, size_t, int) [with T = unsigned char; size_t = long unsigned int; index_t = long int]’
matterExports.cpp:529:22:   required from here
resources.h:154:37: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In instantiation of ‘double interp1_linear(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1580:25:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1199:25:   required from here
signal.h:1460:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1460 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol ) {
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_cubic(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1582:24:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1199:25:   required from here
signal.h:1491:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1491 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1495:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1495 |                 if ( i + 2 < n && udiff(x[i + 2], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1509:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_linear(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1580:25:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = int; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1205:28:   required from here
signal.h:1460:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1460 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol ) {
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_cubic(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1582:24:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = int; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1205:28:   required from here
signal.h:1491:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1491 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1495:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1495 |                 if ( i + 2 < n && udiff(x[i + 2], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1509:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_linear(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1580:25:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1217:28:   required from here
signal.h:1460:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1460 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol ) {
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_cubic(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1582:24:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = double; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1217:28:   required from here
signal.h:1491:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1491 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1495:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1495 |                 if ( i + 2 < n && udiff(x[i + 2], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1509:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_linear(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = double; Ty = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1580:25:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1223:31:   required from here
signal.h:1460:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1460 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol ) {
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘double interp1_cubic(Tx, Tx*, Ty*, index_t, size_t, double, int) [with Tx = double; Ty = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1582:24:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = double; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = double; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1223:31:   required from here
signal.h:1491:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1491 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1495:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1495 |                 if ( i + 2 < n && udiff(x[i + 2], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h:1509:28: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1509 |                 if ( i + 1 < n && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                      ~~~~~~^~~
signal.h: In instantiation of ‘index_t wupper(T, T*, index_t, size_t, double, int) [with T = int; index_t = long int; size_t = long unsigned int]’:
signal.h:1436:24:   required from ‘double interp1_stat(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1572:23:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = int; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = int; Ty = int; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = int; Ty = int; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1199:25:   required from here
signal.h:1425:19: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
 1425 |         while ( i < n - 1 && udiff(x[i + 1], xi, tol_ref) <= tol )
      |                 ~~^~~~~~~
signal.h: In instantiation of ‘index_t wupper(T, T*, index_t, size_t, double, int) [with T = double; index_t = long int; size_t = long unsigned int]’:
signal.h:1436:24:   required from ‘double interp1_stat(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1572:23:   required from ‘double interp1(Tx, Tx*, Ty*, index_t, size_t, double, int, int) [with Tx = double; Ty = int; index_t = long int; size_t = long unsigned int]’
signal.h:1605:16:   required from ‘Tout approx1(Tx, Tx*, Ty*, size_t, size_t, double, int, Tout, int) [with Tx = double; Ty = int; Tout = double; size_t = long unsigned int]’
signal.h:1657:21:   required from ‘size_t do_approx1(Tout*, Tx*, size_t, Tx*, Ty*, size_t, size_t, double, int, Tout, int, int) [with Tx = double; Ty = int; Tout = double; size_t = long unsigned int]’
matterExports.cpp:1205:28:   required from here
signal.h:1425:19: warning: comparison of integer expressions of different signedness: ‘index_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
signal.h: In function ‘void guided_filter(T*, T*, size_t, int, double, double, double*) [with T = int]’:
signal.h:552:36: warning: ‘gmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  552 |                         K2 = (ftol * gmax) * (ftol * gmax);
      |                              ~~~~~~^~~~~~~
signal.h: In function ‘void guided_filter(T*, T*, size_t, int, double, double, double*) [with T = double]’:
signal.h:552:36: warning: ‘gmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  552 |                         K2 = (ftol * gmax) * (ftol * gmax);
      |                              ~~~~~~^~~~~~~
signal.h: In function ‘void bilateral_filter(T*, size_t, int, double, double, double, double*) [with T = int]’:
signal.h:406:46: warning: ‘xrange’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  406 |                                 sdr = xrange * std::exp(-z) / std::sqrt(2);
      |                                       ~~~~~~~^~~~~~~~~~~~~~
signal.h:402:49: warning: ‘xmad’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  402 |                         double z = std::fabs(dx - xmad) / spar;
      |                                              ~~~^~~~~~
signal.h:398:63: warning: ‘xmedian’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |                                         dx += std::fabs(x[ij] - xmedian);
      |                                                         ~~~~~~^~~~~~~~~
In file included from matterExports.h:12,
                 from matterExports.cpp:2:
signal2.h: In function ‘void bilateral_filter2(T*, int, int, int, double, double, double, double*) [with T = int]’:
signal2.h:336:54: warning: ‘xrange’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  336 |                                         sdr = xrange * std::exp(-z) / std::sqrt(2);
      |                                               ~~~~~~~^~~~~~~~~~~~~~
signal2.h:332:57: warning: ‘xmad’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |                                 double z = std::fabs(dx - xmad) / spar;
      |                                                      ~~~^~~~~~
signal2.h:326:77: warning: ‘xmedian’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  326 |                                                         dx += std::fabs(xij - xmedian);
      |                                                                         ~~~~^~~~~~~~~
In file included from sparse.h:5,
                 from matterExports.h:7,
                 from matterExports.cpp:2:
signal.h: In function ‘void bilateral_filter(T*, size_t, int, double, double, double, double*) [with T = double]’:
signal.h:406:46: warning: ‘xrange’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  406 |                                 sdr = xrange * std::exp(-z) / std::sqrt(2);
      |                                       ~~~~~~~^~~~~~~~~~~~~~
signal.h:402:49: warning: ‘xmad’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  402 |                         double z = std::fabs(dx - xmad) / spar;
      |                                              ~~~^~~~~~
signal.h:398:63: warning: ‘xmedian’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |                                         dx += std::fabs(x[ij] - xmedian);
      |                                                         ~~~~~~^~~~~~~~~
In file included from matterExports.h:12,
                 from matterExports.cpp:2:
signal2.h: In function ‘void bilateral_filter2(T*, int, int, int, double, double, double, double*) [with T = double]’:
signal2.h:336:54: warning: ‘xrange’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  336 |                                         sdr = xrange * std::exp(-z) / std::sqrt(2);
      |                                               ~~~~~~~^~~~~~~~~~~~~~
signal2.h:332:57: warning: ‘xmad’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |                                 double z = std::fabs(dx - xmad) / spar;
      |                                                      ~~~^~~~~~
signal2.h:326:77: warning: ‘xmedian’ may be used uninitialized in this function [-Wmaybe-uninitialized]
  326 |                                                         dx += std::fabs(xij - xmedian);
      |                                                                         ~~~~^~~~~~~~~
g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.20-bioc/R/lib -L/usr/local/lib -o matter.so altrep.o init.o matterExports.o -L/home/biocbuild/bbs-3.20-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.20-bioc/R/site-library/00LOCK-matter/00new/matter/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (matter)

Tests output

matter.Rcheck/tests/testthat.Rout


R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(matter)
Loading required package: BiocParallel
Loading required package: Matrix
> 
> test_check("matter")

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[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2032 ]
> 
> proc.time()
   user  system elapsed 
 69.297   2.601  88.054

Example timings

matter.Rcheck/matter-Ex.timings

name	user	system	elapsed
RNGStreams	1.074	0.007	1.082
SnowfastParam-class	0.215	0.014	2.743
approx1	0.000	0.003	0.004
approx2	0.008	0.000	0.008
avg	0.002	0.002	0.003
binpeaks	0.004	0.006	0.010
binvec	0.001	0.000	0.001
bsearch	0.002	0.000	0.002
checksum	0.028	0.005	0.033
chunkApply	0.206	0.025	0.232
chunked-class	0.008	0.001	0.008
colscale	0.108	0.003	0.111
colsweep	0.019	0.000	0.019
convolve_at	0.078	0.001	0.078
coscore	0.032	0.008	0.040
cpal	0.002	0.000	0.003
cv_do	0.151	0.000	0.151
deferred-ops	0.056	0.000	0.055
downsample	0.036	0.000	0.036
drle-class	0.001	0.000	0.001
enhance	0.023	0.000	0.023
estbase	0.013	0.000	0.013
estdim	0.000	0.002	0.003
estnoise	0.041	0.000	0.042
estres	0.001	0.000	0.001
fastmap	0.128	0.000	0.128
fetch	0.056	0.000	0.057
filt1	0.028	0.000	0.028
filt2	0.019	0.003	0.024
filtn	0.004	0.000	0.004
findpeaks	0.031	0.003	0.036
findpeaks_cwt	0.124	0.004	0.128
findpeaks_knn	0.003	0.000	0.002
iQuote	0	0	0
inpoly	0.003	0.000	0.004
isofun	0.022	0.000	0.022
knnsearch	0.001	0.000	0.002
matter-class	0.025	0.000	0.025
matter_arr-class	0.030	0.000	0.029
matter_fct-class	0.018	0.000	0.017
matter_list-class	0.009	0.000	0.008
matter_str-class	0.020	0.000	0.019
mem	0.511	0.003	0.514
mi_learn	0.525	0.001	0.525
nnmf	0.042	0.000	0.042
nscentroids	0.088	0.000	0.087
peakwidths	0.001	0.000	0.001
pinv	0.001	0.000	0.002
plot_signal	0.450	0.027	0.478
pls	0.038	0.001	0.038
prcomp	0.058	0.000	0.058
predscore	0.001	0.000	0.001
rescale	0.000	0.000	0.001
rocscore	0.000	0.002	0.003
rollvec	0.000	0.001	0.001
rowDists	0.080	0.003	0.085
rowStats	0.093	0.000	0.094
seq_rel	0.001	0.000	0.001
sgmix	2.410	0.172	2.581
shingles	0.000	0.004	0.003
simple_logger-class	0.006	0.000	0.007
simspec	0.039	0.004	0.043
sparse_arr-class	0.009	0.000	0.009
stream_stat	0.006	0.000	0.006
struct	0.008	0.000	0.008
summary-stats	0.179	0.032	0.212
to_raster	0.001	0.003	0.004
trans2d	0.040	0.001	0.042
uuid	0.001	0.000	0.001
vizi-functions	0.054	0.008	0.062
warp1	0.031	0.000	0.031
warp2	0.827	0.000	0.828