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This page was generated on 2024-09-07 15:39 -0400 (Sat, 07 Sep 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4711
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 664/2258HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
erccdashboard 1.39.0  (landing page)
Sarah Munro
Snapshot Date: 2024-09-06 14:00 -0400 (Fri, 06 Sep 2024)
git_url: https://git.bioconductor.org/packages/erccdashboard
git_branch: devel
git_last_commit: 9dfd214
git_last_commit_date: 2024-04-30 10:38:14 -0400 (Tue, 30 Apr 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped

BUILD results for erccdashboard on nebbiolo2

To the developers/maintainers of the erccdashboard package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/erccdashboard.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: erccdashboard
Version: 1.39.0
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 erccdashboard
StartedAt: 2024-09-06 17:16:31 -0400 (Fri, 06 Sep 2024)
EndedAt: 2024-09-06 17:16:44 -0400 (Fri, 06 Sep 2024)
EllapsedTime: 13.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 erccdashboard
###
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* checking for file ‘erccdashboard/DESCRIPTION’ ... OK
* preparing ‘erccdashboard’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘erccdashboard.Rnw’ using Sweave
Loading required package: ggplot2
Loading required package: gridExtra

Error: processing vignette 'erccdashboard.Rnw' failed with diagnostics:
 chunk 5 (label = runDashboardRatcount) 
Error in makeCompressedMatrix(glmfit$s2.post, dim(glmfit$counts), byrow = FALSE) : 
  'dims[1]' should equal length of 'x'

--- failed re-building ‘erccdashboard.Rnw’

SUMMARY: processing the following file failed:
  ‘erccdashboard.Rnw’

Error: Vignette re-building failed.
Execution halted