Back to Build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-09-07 15:39 -0400 (Sat, 07 Sep 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4711 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 502/2258 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
dar 1.1.0 (landing page) Francesc Catala-Moll
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
To the developers/maintainers of the dar package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/dar.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: dar |
Version: 1.1.0 |
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 dar |
StartedAt: 2024-09-06 16:56:56 -0400 (Fri, 06 Sep 2024) |
EndedAt: 2024-09-06 16:58:50 -0400 (Fri, 06 Sep 2024) |
EllapsedTime: 114.2 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 dar ### ############################################################################## ############################################################################## * checking for file ‘dar/DESCRIPTION’ ... OK * preparing ‘dar’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘article.Rmd’ using rmarkdown [WARNING] Could not parse YAML metadata at line 12 column 1: leading empty lines contain more spaces than the first non-empty line in scalar: " \n" [WARNING] This document format requires a nonempty <title> element. Defaulting to 'article.knit' as the title. To specify a title, use 'title' in metadata or --metadata title="...". --- finished re-building ‘article.Rmd’ --- re-building ‘dar.Rmd’ using rmarkdown --- finished re-building ‘dar.Rmd’ --- re-building ‘data_import.Rmd’ using rmarkdown Quitting from lines 151-166 [unnamed-chunk-6] (data_import.Rmd) Error: processing vignette 'data_import.Rmd' failed with diagnostics: argument "..3" is missing, with no default --- failed re-building ‘data_import.Rmd’ --- re-building ‘filtering_subsetting.Rmd’ using rmarkdown --- finished re-building ‘filtering_subsetting.Rmd’ --- re-building ‘import_export_recipes.Rmd’ using rmarkdown --- finished re-building ‘import_export_recipes.Rmd’ SUMMARY: processing the following file failed: ‘data_import.Rmd’ Error: Vignette re-building failed. Execution halted