| Back to Build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-09-07 15:39 -0400 (Sat, 07 Sep 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4711 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 374/2258 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ClusterJudge 1.27.0 (landing page) Adrian Pasculescu
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
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To the developers/maintainers of the ClusterJudge package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ClusterJudge.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: ClusterJudge |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 ClusterJudge |
| StartedAt: 2024-09-06 16:44:41 -0400 (Fri, 06 Sep 2024) |
| EndedAt: 2024-09-06 16:45:25 -0400 (Fri, 06 Sep 2024) |
| EllapsedTime: 44.1 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 ClusterJudge
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* checking for file ‘ClusterJudge/DESCRIPTION’ ... OK
* preparing ‘ClusterJudge’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* saving partial Rd database
* creating vignettes ... ERROR
--- re-building ‘ClusterJudge-intro.Rmd’ using rmarkdown
Warning: The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "Vignette Title", and the latter is "ClusterJudge". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check.
Error running filter pandoc-citeproc:
Could not find executable pandoc-citeproc
Error: processing vignette 'ClusterJudge-intro.Rmd' failed with diagnostics:
pandoc document conversion failed with error 83
--- failed re-building ‘ClusterJudge-intro.Rmd’
SUMMARY: processing the following file failed:
‘ClusterJudge-intro.Rmd’
Error: Vignette re-building failed.
Execution halted