Workflows build report for BioC 3.9 - BUILD report for chipseqDB on malbec2

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data chipseqDB
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* checking for file ‘chipseqDB/DESCRIPTION’ ... OK
* preparing ‘chipseqDB’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘cbp.Rmd’ using rmarkdown
snapshotDate(): 2019-04-29
see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
loading from cache 
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
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Loading required package: GenomeInfoDb
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect,
    is.unsorted, lapply, mapply, match, mget, order, paste, pmax,
    pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply,
    setdiff, sort, table, tapply, union, unique, unsplit, which,
    which.max, which.min

Loading required package: S4Vectors
Loading required package: stats4

Attaching package: 'S4Vectors'

The following object is masked from 'package:base':

    expand.grid

Loading required package: IRanges
Loading required package: GenomicRanges
Loading required package: Biostrings
Loading required package: XVector

Attaching package: 'Biostrings'

The following object is masked from 'package:base':

    strsplit

Loading required package: dbplyr
adding rname 'https://www.encodeproject.org/files/ENCFF547MET/@@download/ENCFF547MET.bed.gz'
Warning: download failed
  web resource path: 'https://www.encodeproject.org/files/ENCFF547MET/@@download/ENCFF547MET.bed.gz'
  local file path: 'local/3d264bbed763_ENCFF547MET.bed.gz'
  reason: Gateway Timeout (HTTP 504).
Warning: bfcadd() failed; resource removed
  rid: BFC1
  fpath: 'https://www.encodeproject.org/files/ENCFF547MET/@@download/ENCFF547MET.bed.gz'
  reason: download failed
Warning in value[[3L]](cond) :
  
trying to add rname 'https://www.encodeproject.org/files/ENCFF547MET/@@download/ENCFF547MET.bed.gz' produced error:
  bfcadd() failed; see warnings()
Quitting from lines 71-78 (cbp.Rmd) 
Error: processing vignette 'cbp.Rmd' failed with diagnostics:
not all 'rnames' found or unique.
--- failed re-building ‘cbp.Rmd’

--- re-building ‘h3k9ac.Rmd’ using rmarkdown
snapshotDate(): 2019-04-29
see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
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    'EH2071 : 2071'
see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
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    'EH2075 : 2075'
see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
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see ?chipseqDBData and browseVignettes('chipseqDBData') for documentation
downloading 0 resources
loading from cache 
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adding rname 'https://www.encodeproject.org/files/ENCFF547MET/@@download/ENCFF547MET.bed.gz'
Warning: download failed
  web resource path: 'https://www.encodeproject.org/files/ENCFF547MET/@@download/ENCFF547MET.bed.gz'
  local file path: 'local/3d26790094b1_ENCFF547MET.bed.gz'
  reason: Bad Gateway (HTTP 502).
Warning: bfcadd() failed; resource removed
  rid: BFC2
  fpath: 'https://www.encodeproject.org/files/ENCFF547MET/@@download/ENCFF547MET.bed.gz'
  reason: download failed
Warning in value[[3L]](cond) :
  
trying to add rname 'https://www.encodeproject.org/files/ENCFF547MET/@@download/ENCFF547MET.bed.gz' produced error:
  bfcadd() failed; see warnings()
Quitting from lines 87-91 (h3k9ac.Rmd) 
Error: processing vignette 'h3k9ac.Rmd' failed with diagnostics:
not all 'rnames' found or unique.
--- failed re-building ‘h3k9ac.Rmd’

--- re-building ‘intro.Rmd’ using rmarkdown
--- finished re-building ‘intro.Rmd’

SUMMARY: processing the following files failed:
  ‘cbp.Rmd’ ‘h3k9ac.Rmd’

Error: Vignette re-building failed.
Execution halted
BUILD report for chipseqDB on malbec2

Summary

Command output
