Peter Haverty
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/gCrisprTools |
| Branch: RELEASE_3_9 |
| Last Commit: abeed76 |
| Last Changed Date: 2019-05-02 11:54:03 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:36:40 -0400 (Wed, 16 Oct 2019).
| Package 612/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| gCrisprTools 1.12.0 Peter Haverty
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: gCrisprTools |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gCrisprTools_1.12.0.tar.gz && rm -rf gCrisprTools.buildbin-libdir && mkdir gCrisprTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gCrisprTools.buildbin-libdir gCrisprTools_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gCrisprTools_1.12.0.zip && rm gCrisprTools_1.12.0.tar.gz gCrisprTools_1.12.0.zip |
| StartedAt: 2019-10-15 19:14:54 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 19:38:49 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 1434.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gCrisprTools_1.12.0.tar.gz && rm -rf gCrisprTools.buildbin-libdir && mkdir gCrisprTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gCrisprTools.buildbin-libdir gCrisprTools_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gCrisprTools_1.12.0.zip && rm gCrisprTools_1.12.0.tar.gz gCrisprTools_1.12.0.zip
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install for i386
* installing *source* package 'gCrisprTools' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'gCrisprTools'
finding HTML links ... done
aln html
ann html
appendDateAndExt html
ct.DirectionalTests html
ct.GCbias html
ct.PRC html
ct.PantherPathwayEnrichment html
ct.ROC html
ct.RRAaPvals html
ct.RRAalpha html
ct.RRAalphaBatch html
ct.alignmentChart html
ct.alphaBeta html
ct.applyAlpha html
ct.drawColorLegend html
ct.drawFlat html
ct.ecdf html
ct.exprsColor html
ct.filterReads html
ct.gRNARankByReplicate html
ct.generateResults html
ct.getPanther html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp4kC0Bj/R.INSTALL108461087e17/gCrisprTools/man/ct.getPanther.Rd:16: file link 'PANTHER.db' in package 'PANTHER.db' does not exist and so has been treated as a topic
ct.guideCDF html
ct.inputCheck html
ct.makeContrastReport html
ct.makeQCReport html
ct.makeReport html
ct.makeRhoNull html
ct.normalizeBySlope html
ct.normalizeGuides html
ct.normalizeMedians html
ct.normalizeNTC html
ct.normalizeSpline html
ct.numcores html
ct.prepareAnnotation html
ct.preprocessFit html
ct.rawCountDensities html
ct.resultCheck html
ct.stackGuides html
ct.targetSetEnrichment html
ct.topTargets html
ct.viewControls html
ct.viewGuides html
dir.writable html
es html
essential.genes html
fit html
gCrisprTools-package html
initOutDir html
renderReport html
resultsDF html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'gCrisprTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gCrisprTools' as gCrisprTools_1.12.0.zip
* DONE (gCrisprTools)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'gCrisprTools' successfully unpacked and MD5 sums checked